RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 C9orf85Q96MD7 179 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 TMEM237Q96Q45 408 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 RUFY1Q96T51 708 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 FUNDC2Q9BWH2 189 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 TRIM9Q9C026 710 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 TRPV6Q9H1D0 765 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 SYTL2Q9HCH5 934 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 ZNF331Q9NQX6 463 aaPredicted RBP2.19□□□□□ -2.06
GCFC2-209ENST00000486016 ANO10Q9NW15 660 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 NARFQ9UHQ1 456 aa2.19□□□□□ -2.06
GCFC2-209ENST00000486016 DIMT1Q9UNQ2 313 aaKnown RBP2.19□□□□□ -2.06
GCFC2-209ENST00000486016 MRPS2Q9Y399 296 aaKnown RBP2.19□□□□□ -2.06
GCFC2-209ENST00000486016 PTCH1Q13635 1447 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 CHEK1O14757 476 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 HTATSF1O43719 755 aaKnown RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 TSPAN2O60636 221 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 REC8O95072 547 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 NUDT14O95848 222 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SLC4A1P02730 911 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 UCP1P25874 307 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 TKTL1P51854 596 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 STARD6P59095 220 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SHHQ15465 462 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 PKN2Q16513 984 aaKnown RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 GPAT3Q53EU6 434 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 PAGE2BQ5JRK9 111 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 APOOLQ6UXV4 268 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 PRSS48Q7RTY5 328 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 CHCHD4Q8N4Q1 142 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 ZNF561Q8N587 486 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 RELL2Q8NC24 303 aaPredicted RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 CCNYQ8ND76 341 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 OR8H1Q8NGG4 311 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 FBXO25Q8TCJ0 367 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SLC13A3Q8WWT9 602 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 COG3Q96JB2 828 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SPAG8Q99932 426 aaPredicted RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SPXQ9BT56 116 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 DDX47Q9H0S4 455 aaKnown RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 ABCG8Q9H221 673 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 PATZ1Q9HBE1 687 aaKnown RBP2.18□□□□□ -2.06
GCFC2-209ENST00000486016 SLC25A19Q9HC21 320 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 COPS7AQ9UBW8 275 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 FAM153AQ9UHL3 310 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 ATG4BQ9Y4P1 393 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 GPRASP1Q5JY77 1395 aa2.18□□□□□ -2.06
GCFC2-209ENST00000486016 KIF7Q2M1P5 1343 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 A0A0A6YYD4 124 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 A0A0U1RRA0 63 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 MEI4A8MW99 385 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 G3V3Y1 287 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 NME2P1O60361 137 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 OAS1P00973 400 aaKnown RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 CXCL10P02778 98 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ALPPP05187 535 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 WNT2P09544 360 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ALPPL2P10696 532 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 MBL2P11226 248 aaPredicted RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 MARCKSP29966 332 aaPredicted RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 SFNP31947 248 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ACADSBP45954 432 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 CCL11P51671 97 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 NLRP11P59045 1033 aaKnown RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 WASHC5Q12768 1159 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 KLF5Q13887 457 aaPredicted RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 SERTAD2Q14140 314 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 PDK1Q15118 436 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 CMPK2Q5EBM0 449 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ZNF691Q5VV52 312 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 HIST2H2AA3Q6FI13 130 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 CDC42EP5Q6NZY7 148 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 STOX1Q6ZVD7 989 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 MIER3Q7Z3K6 550 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 BNIPLQ7Z465 357 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 SLC22A16Q86VW1 577 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 BATF2Q8N1L9 274 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ZNF619Q8N2I2 560 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 GPATCH11Q8N954 259 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 P3H4Q92791 437 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 DPH7Q9BTV6 452 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 XPO4Q9C0E2 1151 aaKnown RBP2.17□□□□□ -2.06
GCFC2-209ENST00000486016 SIRPDQ9H106 197 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 VPS54Q9P1Q0 977 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 KCNN3Q9UGI6 736 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 ZNF221Q9UK13 617 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 DNPEPQ9ULA0 475 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 NPC1L1Q9UHC9 1359 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 RPGRIP1LQ68CZ1 1315 aa2.17□□□□□ -2.06
GCFC2-209ENST00000486016 IGLV3-16A0A075B6K0 115 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 TMEM89A2RUT3 159 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 ERVV-1B6SEH8 477 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 K7ERI5 159 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SH2D1BO14796 132 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SEC22BO75396 215 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SYNGR4O95473 234 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 FCER2P06734 321 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 PGK2P07205 417 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 HIST1H2AGP0C0S8 130 aaPredicted RBP2.16□□□□□ -2.06
GCFC2-209ENST00000486016 RPA1P27694 616 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms