RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ATCAYQ86WG3 371 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 SLC16A11Q8NCK7 471 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 DNAJB8Q8NHS0 232 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 NR4A3Q92570 626 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 HGDQ93099 445 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 VPS33AQ96AX1 596 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 JSRP1Q96MG2 331 aaPredicted RBP10.88□□□□□ -0.67
HPS4-214ENST00000485842 ZNF317Q96PQ6 595 aaPredicted RBP10.88□□□□□ -0.67
HPS4-214ENST00000485842 PANX1Q96RD7 426 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 NODALQ96S42 347 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 SLC35A5Q9BS91 424 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 DOHHQ9BU89 302 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 ACTRT3Q9BYD9 372 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 METTL7AQ9H8H3 244 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 SH2D2AQ9NP31 389 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 TUBA8Q9NY65 449 aaPredicted RBP10.88□□□□□ -0.67
HPS4-214ENST00000485842 KLRF1Q9NZS2 232 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 CCDC167Q9P0B6 97 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 BTNL2Q9UIR0 455 aa10.88□□□□□ -0.67
HPS4-214ENST00000485842 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
HPS4-214ENST00000485842 SVILO95425 2214 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 PRAMEF25A6NGN4 478 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 NPIPA5E9PKD4 350 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 J3QKU1 62 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ACOT7O00154 380 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 TSPAN2O60636 221 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 KCNH1O95259 989 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 GSNP06396 782 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 KRT16P08779 473 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 CYP4B1P13584 511 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 MST1P26927 711 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 CHI3L1P36222 383 aaPredicted RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 CDKN2CP42773 168 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ATP4BP51164 291 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 CASP9P55211 416 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 KCNK10P57789 538 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 MRPS22P82650 360 aaKnown RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 LRRC74AQ0VAA2 488 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 EFR3AQ14156 821 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 AGKQ53H12 422 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 RNFT1Q5M7Z0 435 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 C6orf10Q5SRN2 563 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 CDC73Q6P1J9 531 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ZCCHC12Q6PEW1 402 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ZNF621Q6ZSS3 439 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 C6orf120Q7Z4R8 191 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ZFP62Q8NB50 900 aaPredicted RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 POGLUT1Q8NBL1 392 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 ADAMTS15Q8TE58 950 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 CDS1Q92903 461 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 TMCO6Q96DC7 493 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 SLC35A4Q96G79 324 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 SECISBP2Q96T21 854 aaKnown RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 OSBPL11Q9BXB4 747 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 RMND5AQ9H871 391 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 GPATCH2Q9NW75 528 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 MRTO4Q9UKD2 239 aaKnown RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 VPS4AQ9UN37 437 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 NPIPA1Q9UND3 350 aa10.87□□□□□ -0.67
HPS4-214ENST00000485842 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.87□□□□□ -0.67
HPS4-214ENST00000485842 NINQ8N4C6 2090 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 NBASA2RRP1 2371 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 CCDC154A6NI56 674 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 RFXANKO14593 260 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 HS6ST1O60243 411 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ICOSLGO75144 302 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ANP32DO95626 131 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 IGKV1D-16P01601 117 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 MAP3K8P41279 467 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 CASP3P42574 277 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 UQCRFS1P47985 274 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 MASP1P48740 699 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 SEC24CP53992 1094 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 PNLIPRP2P54317 469 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 PSMD4P55036 377 aaKnown RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 GNGT1P63211 74 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 IRX1P78414 480 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 POU6F2P78424 691 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 MRPL49Q13405 166 aaKnown RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 RCAN2Q14206 197 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ELOAQ14241 798 aaKnown RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 TBCELQ5QJ74 424 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 EXOSC6Q5RKV6 272 aaKnown RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 CCNJQ5T5M9 372 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ZNF324BQ6AW86 544 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 TNFAIP8L2Q6P589 184 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 FIGNL1Q6PIW4 674 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 SLC2A7Q6PXP3 512 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 MSANTD1Q6ZTZ1 278 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 FUNDC1Q8IVP5 155 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 TRIML2Q8N7C3 387 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 GALNT11Q8NCW6 608 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 OR5D16Q8NGK9 328 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 GOT1L1Q8NHS2 421 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 HOXB13Q92826 284 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 SPDL1Q96EA4 605 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ITCHQ96J02 903 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms