RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 EFNA1P20827 205 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-213ENST00000485080 DNASE1L1P49184 302 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 CCT3P49368 545 aaKnown RBP16.3■□□□□ 0.2
SREBF1-213ENST00000485080 PRIM2P49643 509 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 KCNJ2P63252 427 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 LRRC74AQ0VAA2 488 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 CMPK2Q5EBM0 449 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 SPANXN4Q5MJ08 99 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 ACAD11Q709F0 780 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 GHDCQ8N2G8 530 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 FAM109AQ8N4B1 249 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 OR5M3Q8NGP4 307 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 TMEM41AQ96HV5 264 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 STACQ99469 402 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 SIKE1Q9BRV8 207 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 DOHHQ9BU89 302 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 TCF7L2Q9NQB0 619 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 DUSP22Q9NRW4 184 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
SREBF1-213ENST00000485080 NPIPA1Q9UND3 350 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 ZNF835Q9Y2P0 537 aa16.3■□□□□ 0.2
SREBF1-213ENST00000485080 LRRC3CA6NJW4 275 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 G3V3Y1 287 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 POLR3GO15318 223 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 EDF1O60869 148 aaKnown RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 IGHG3P01860 377 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 KRT16P08779 473 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 IL12AP29459 219 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 LCN1P31025 176 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 S100A3P33764 101 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 GABRA3P34903 492 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 KRT20P35900 424 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 PSMD4P55036 377 aaKnown RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 AQP5P55064 265 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 RBPJQ06330 500 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 DECR1Q16698 335 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 EIF2S3LQ2VIR3 472 aaKnown RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 FAM174BQ3ZCQ3 159 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 PRAMEF20Q5VT98 475 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 TMEM198Q66K66 360 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 Q6ZPB1 254 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 CHERPQ8IWX8 916 aaKnown RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 TMEM251Q8N6I4 163 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-213ENST00000485080 FAM110BQ8TC76 370 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 RILPQ96NA2 401 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 CCDC115Q96NT0 180 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 NODALQ96S42 347 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 ZBTB18Q99592 522 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 CCDC134Q9H6E4 229 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 GPATCH2Q9NW75 528 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 TMEM45AQ9NWC5 275 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 BTNL2Q9UIR0 455 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 SNX8Q9Y5X2 465 aa16.29■□□□□ 0.2
SREBF1-213ENST00000485080 HS6ST1O60243 411 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 SLC22A3O75751 556 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
SREBF1-213ENST00000485080 IL6P05231 212 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 PGRP06401 933 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ACP2P11117 423 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ELAVL4P26378 380 aaKnown RBP16.28■□□□□ 0.2
SREBF1-213ENST00000485080 IL12BP29460 328 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 RFC3P40938 356 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 PTGDSP41222 190 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 PRKAG1P54619 331 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 PLGLB1Q02325 96 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 SRSF1Q07955 248 aaKnown RBP eCLIP16.28■□□□□ 0.2
SREBF1-213ENST00000485080 FNDC7Q5VTL7 733 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 BICRALQ6AI39 1079 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 CDC73Q6P1J9 531 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 CLECL1Q8IZS7 167 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 SLC16A11Q8NCK7 471 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 OR52N2Q8NGI0 321 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ZNF597Q96LX8 424 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ACTRT3Q9BYD9 372 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 UBQLN3Q9H347 655 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ZNF703Q9H7S9 590 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-213ENST00000485080 METTL7AQ9H8H3 244 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ACKR4Q9NPB9 350 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 EQTNQ9NQ60 294 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ABCG2Q9UNQ0 655 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 PCNX1Q96RV3 2341 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 DOPEY2Q9Y3R5 2298 aa16.28■□□□□ 0.2
SREBF1-213ENST00000485080 ASH1LQ9NR48 2969 aaKnown RBP16.27■□□□□ 0.2
SREBF1-213ENST00000485080 MYO7BQ6PIF6 2116 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 A0A1B0GVC2 190 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 PRAMEF25A6NGN4 478 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 CFLARO15519 480 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 ICOSLGO75144 302 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 KCNH1O95259 989 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 NGFRP08138 427 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 ALOX5P09917 674 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 MAN2A2P49641 1150 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 KCNK10P57789 538 aa16.27■□□□□ 0.2
SREBF1-213ENST00000485080 LASP1Q14847 261 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms