RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 OR2B11Q5JQS5 317 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 TMEM270Q6UE05 265 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 B3GLCTQ6Y288 498 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 HSD17B13Q7Z5P4 300 aaPredicted RBP1.9□□□□□ -2.11
VPS50-216ENST00000484954 CSNK1A1LQ8N752 337 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 ZBTB44Q8NCP5 570 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 MRPL9Q9BYD2 267 aaKnown RBP1.9□□□□□ -2.11
VPS50-216ENST00000484954 GLIPR2Q9H4G4 154 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 PTGES2Q9H7Z7 377 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 AKIRIN1Q9H9L7 192 aaPredicted RBP1.9□□□□□ -2.11
VPS50-216ENST00000484954 PATZ1Q9HBE1 687 aaKnown RBP1.9□□□□□ -2.11
VPS50-216ENST00000484954 DAZ3Q9NR90 486 aaKnown RBP1.9□□□□□ -2.11
VPS50-216ENST00000484954 ELOVL2Q9NXB9 296 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 MIOXQ9UGB7 285 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 STX8Q9UNK0 236 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 ENTPD4Q9Y227 616 aa1.9□□□□□ -2.11
VPS50-216ENST00000484954 TRBV7-9A0A0J9YWB2 115 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 CCDC69A6NI79 296 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 CFLARO15519 480 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 GPX5O75715 221 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 TOXO94900 526 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 H2AFZP0C0S5 128 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HIST1H2AGP0C0S8 130 aaPredicted RBP1.89□□□□□ -2.11
VPS50-216ENST00000484954 TOP1P11387 765 aaKnown RBP1.89□□□□□ -2.11
VPS50-216ENST00000484954 STK19P49842 368 aaPredicted RBP1.89□□□□□ -2.11
VPS50-216ENST00000484954 STX1BP61266 288 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 EGFEM1PQ0D2K5 195 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 BNIP1Q12981 228 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 DPYSQ14117 519 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 RCN2Q14257 317 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 SLC39A12Q504Y0 691 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 MEDAGQ5VYS4 303 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HIST2H2AA3Q6FI13 130 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 ASPHD2Q6ICH7 369 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HACD2Q6Y1H2 254 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 DPY19L2P2Q6ZN68 376 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 FRA10AC1Q70Z53 315 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 PARGQ86W56 976 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.89□□□□□ -2.11
VPS50-216ENST00000484954 TMEM37Q8WXS4 190 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HIST1H2ACQ93077 130 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 HAVCR1Q96D42 359 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 CFAP36Q96G28 342 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 GLT8D2Q9H1C3 349 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 ABCG8Q9H221 673 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 NANOGQ9H9S0 305 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 FAM114A2Q9NRY5 505 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 PIGVQ9NUD9 493 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 LHX3Q9UBR4 397 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 MAD2L2Q9UI95 211 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 FBXW2Q9UKT8 454 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 RAB26Q9ULW5 256 aa1.89□□□□□ -2.11
VPS50-216ENST00000484954 IGLV3-16A0A075B6K0 115 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 USP27XA6NNY8 438 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 CHEK1O14757 476 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 PSMA7O14818 248 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 HTATSF1O43719 755 aaKnown RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 TRAF3IP2O43734 574 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 NF2P35240 595 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 CCL11P51671 97 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 RPS6P62753 249 aaKnown RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 RPL32P62910 135 aaKnown RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 ZNF45Q02386 682 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 TLE4Q04727 773 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 SLMAPQ14BN4 828 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 RAB35Q15286 201 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 CMPK2Q5EBM0 449 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 GLRA4Q5JXX5 417 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 HECTD3Q5T447 861 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 PRAMEF7Q5VXH5 474 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 RANBP3LQ86VV4 465 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 AMZ2Q86W34 360 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 DCAF4L2Q8NA75 395 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 ZNF397Q8NF99 534 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 GDAP1Q8TB36 358 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 PSMG2Q969U7 264 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 TMEM45BQ96B21 275 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 STARD4Q96DR4 205 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 RTBDNQ9BSG5 229 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 NICN1Q9BSH3 213 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 CNPY3Q9BT09 278 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 SCRT1Q9BWW7 348 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 FUT8Q9BYC5 575 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 ABCG4Q9H172 646 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 MMADHCQ9H3L0 296 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 CYTL1Q9NRR1 136 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 NDUFA13Q9P0J0 144 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 AKAP7Q9P0M2 348 aaPredicted RBP1.88□□□□□ -2.11
VPS50-216ENST00000484954 ONECUT1Q9UBC0 465 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 TRPC4Q9UBN4 977 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 DUSP12Q9UNI6 340 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 L3MBTL1Q9Y468 752 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 SNX5Q9Y5X3 404 aa1.88□□□□□ -2.11
VPS50-216ENST00000484954 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
VPS50-216ENST00000484954 ANKRD63C9JTQ0 380 aa1.87□□□□□ -2.11
VPS50-216ENST00000484954 ZNF263O14978 683 aa1.87□□□□□ -2.11
VPS50-216ENST00000484954 MAGEB4O15481 346 aaPredicted RBP1.87□□□□□ -2.11
VPS50-216ENST00000484954 ATP6V1G1O75348 118 aa1.87□□□□□ -2.11
VPS50-216ENST00000484954 TGDSO95455 350 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms