RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 JPH2Q9BR39 696 aaPredicted RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 TEX13BQ9BXU2 312 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 DCTPP1Q9H773 170 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 WDR76Q9H967 626 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PLEKHA3Q9HB20 300 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 YAE1D1Q9NRH1 226 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 XPO7Q9UIA9 1087 aaKnown RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 SLC6A5Q9Y345 797 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 ZNF175Q9Y473 711 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 AFF2P51816 1311 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 NPIPA5A0A0B4J1W7 369 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 A0A1B0GUL7 405 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 CLRN2A0PK11 232 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 BCLAF3A2AJT9 711 aaKnown RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 OR5H15A6NDH6 313 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 FAM220BPB1ANY3 271 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ANHXE9PGG2 379 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 NPIPA5E9PKD4 350 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 SH2D1BO14796 132 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ADAM12O43184 909 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 TBX19O60806 448 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 STK17BO94768 372 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 SLC35G4P0C7Q5 338 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 MGMTP16455 207 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ADRA1AP35348 466 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 IL9RQ01113 521 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 FASTKQ14296 549 aaKnown RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 TATDN3Q17R31 274 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 HKDC1Q2TB90 917 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ADPRMQ3LIE5 342 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 LRIT3Q3SXY7 679 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 SLC36A3Q495N2 470 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ZNF311Q5JNZ3 666 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 SPATA46Q5T0L3 261 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ATAD3BQ5T9A4 648 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 KDELC1Q6UW63 502 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 CARM1Q86X55 608 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 WDR49Q8IV35 697 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 GCNT2Q8N0V5 402 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 C11orf42Q8N5U0 333 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 STKLD1Q8NE28 680 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 BEST4Q8NFU0 473 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 WDR36Q8NI36 951 aaKnown RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 ZNF606Q8WXB4 792 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 NABP1Q96AH0 204 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 MYCBPQ99417 103 aaPredicted RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 MRPL13Q9BYD1 178 aaKnown RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 POLR1EQ9GZS1 481 aaKnown RBP3.05□□□□□ -1.92
SMC4-215ENST00000484799 P2RX2Q9UBL9 471 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 TBK1Q9UHD2 729 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 CIDEBQ9UHD4 219 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 RSPH14Q9UHP6 348 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 ATP6V1HQ9UI12 483 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 SNX6Q9UNH7 406 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 FOXJ3Q9UPW0 622 aa3.05□□□□□ -1.92
SMC4-215ENST00000484799 CARMIL1Q5VZK9 1371 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 KIF16BQ96L93 1317 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 A0A0U1RQV5 110 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 LOC390937A0A1W2PQ73 354 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 SH3PXD2BA1X283 911 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 GPR89AB7ZAQ6 455 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 H0YCG3 227 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 K7EQG2 157 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 MPHOSPH10O00566 681 aaKnown RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 MAGEB3O15480 346 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 GMFGO60234 142 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 FHP07954 510 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 GPR89BP0CG08 455 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 SELEP16581 610 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 PAICSP22234 425 aaKnown RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 PSMA5P28066 241 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 HNMTP50135 292 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 RPL27P61353 136 aaKnown RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 ITPK1Q13572 414 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 CYLC2Q14093 348 aaPredicted RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 ZNF79Q15937 498 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 LINC00242Q5T6M2 205 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 STEAP1BQ6NZ63 245 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 ARMCX5Q6P1M9 558 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 NIPAL3Q6P499 406 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 CENPUQ71F23 418 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 ARMCX2Q7L311 632 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 P4HA3Q7Z4N8 544 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 VASH2Q86V25 355 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 CBWD2Q8IUF1 395 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 CCDC36Q8IYA8 594 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 ZNF397Q8NF99 534 aaPredicted RBP3.04□□□□□ -1.92
SMC4-215ENST00000484799 C11orf52Q96A22 123 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 VPS35Q96QK1 796 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 CXXC4Q9H2H0 198 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 LPAR2Q9HBW0 351 aa3.04□□□□□ -1.92
SMC4-215ENST00000484799 SYNJ2O15056 1496 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SALL1Q9NSC2 1324 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 TEX48A0A1B0GUV7 120 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 A8MU76 341 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 WASH3PC4AMC7 463 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 FBP2O00757 339 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SRPX2O60687 465 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms