RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SERHLQ9NQF3 203 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 QPCTLQ9NXS2 382 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 FLRT3Q9NZU0 649 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 FAM215AQ9Y5M1 114 aa11.22□□□□□ -0.61
MSH5-216ENST00000484309 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
MSH5-216ENST00000484309 ABCA12Q86UK0 2595 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 OR6C70A6NIJ9 312 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 TMEM114B3SHH9 223 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 PLOD2O00469 737 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SNPHO15079 494 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SCAMP2O15127 329 aaKnown RBP11.21□□□□□ -0.61
MSH5-216ENST00000484309 BIRC5O15392 142 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SCO2O43819 266 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 ERLIN1O75477 346 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 ZWINTO95229 277 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 PSMG1O95456 288 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 DHRS4L1P0CG22 281 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 CYP4B1P13584 511 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 TCEA1P23193 301 aaKnown RBP11.21□□□□□ -0.61
MSH5-216ENST00000484309 MAPK1P28482 360 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 HPCAL1P37235 193 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 ASMTP46597 345 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SLC1A6P48664 564 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 PRKAG1P54619 331 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 MANFP55145 182 aaKnown RBP11.21□□□□□ -0.61
MSH5-216ENST00000484309 ZNF630Q2M218 657 aaPredicted RBP11.21□□□□□ -0.61
MSH5-216ENST00000484309 IL23RQ5VWK5 629 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 TIGD3Q6B0B8 471 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 RTL6Q6ICC9 239 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 TMEM211Q6ICI0 200 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 OR5M10Q6IEU7 315 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SLC30A6Q6NXT4 461 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 LRIG3Q6UXM1 1119 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 ZFP28Q8NHY6 868 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 CA5BP1Q8WTZ4 195 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 TMCO6Q96DC7 493 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 OTUB1Q96FW1 271 aaPredicted RBP11.21□□□□□ -0.61
MSH5-216ENST00000484309 PGM2Q96G03 612 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 SORT1Q99523 831 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 ACKR4Q9NPB9 350 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 COQ3Q9NZJ6 369 aa11.21□□□□□ -0.61
MSH5-216ENST00000484309 MED12LQ86YW9 2145 aa11.21□□□□□ -0.62
MSH5-216ENST00000484309 GXYLT2A0PJZ3 443 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 NKX2-6A6NCS4 301 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 KDM4EB2RXH2 506 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 TBX19O60806 448 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 SLITRK5O94991 958 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 HPNP05981 417 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 LAMP1P11279 417 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 PRPS2P11908 318 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 AGAP20933 346 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 WNT3P56703 355 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 CRYZQ08257 329 aaKnown RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 STX5Q13190 355 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 GAB1Q13480 694 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 EFR3AQ14156 821 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 ZNHIT3Q15649 155 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 DCST1Q5T197 706 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 C1orf185Q5T7R7 199 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 TMEM81Q6P7N7 255 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 B3GNT6Q6ZMB0 384 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 GALNT10Q86SR1 603 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 CROCCP2Q86T23 111 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 WDSUB1Q8N9V3 476 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 FAM83FQ8NEG4 500 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 NUP43Q8NFH3 380 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 PIK3R3Q92569 461 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 RND1Q92730 232 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 NTNG2Q96CW9 530 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 ZBED6CLQ96FA7 236 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 ZNF764Q96H86 408 aaPredicted RBP11.2□□□□□ -0.62
MSH5-216ENST00000484309 TTYH2Q9BSA4 534 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 YIPF4Q9BSR8 244 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 UCK2Q9BZX2 261 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 CBLCQ9ULV8 474 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 RAP2CQ9Y3L5 183 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 WIF1Q9Y5W5 379 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 ACTL7BQ9Y614 415 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 TEX15Q9BXT5 2789 aa11.2□□□□□ -0.62
MSH5-216ENST00000484309 TMEM120BA0PK00 339 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 B4DXG7 233 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
MSH5-216ENST00000484309 ABCB7O75027 752 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 WDR1O75083 606 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 GLI4P10075 376 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 ACP2P11117 423 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 G6PDP11413 515 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 PRF1P14222 555 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 BMP7P18075 431 aa11.19□□□□□ -0.62
MSH5-216ENST00000484309 ELAVL4P26378 380 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms