RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 UBDO15205 165 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 POLR3GO15318 223 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 UNC5CO95185 931 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 IL33O95760 270 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 IGHG3P01860 377 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 KRT16P08779 473 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 ACP2P11117 423 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 ELAVL4P26378 380 aaKnown RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 IL12AP29459 219 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 IL12BP29460 328 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 KRT20P35900 424 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 PTGDSP41222 190 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 CCT3P49368 545 aaKnown RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 GAB1Q13480 694 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 DECR1Q16698 335 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 PGS1Q32NB8 556 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 FAM174BQ3ZCQ3 159 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 TMEM198Q66K66 360 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 NXNQ6DKJ4 435 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 CDC73Q6P1J9 531 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 Q6ZPB1 254 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 MSANTD1Q6ZTZ1 278 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 TMEM251Q8N6I4 163 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 VPS37AQ8NEZ2 397 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 OR4N2Q8NGD1 307 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 OR5M3Q8NGP4 307 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 GOT1L1Q8NHS2 421 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 TMCO6Q96DC7 493 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 MAGED4Q96JG8 741 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 RILPQ96NA2 401 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 CCDC115Q96NT0 180 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 NODALQ96S42 347 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 ZBTB18Q99592 522 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 TMEM45AQ9NWC5 275 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 MRTO4Q9UKD2 239 aaKnown RBP14.56□□□□□ -0.08
UPF3A-208ENST00000484246 NPIPA1Q9UND3 350 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 ABCG2Q9UNQ0 655 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 ZNF835Q9Y2P0 537 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 TENM4Q6N022 2769 aa14.56□□□□□ -0.08
UPF3A-208ENST00000484246 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 ADAM10O14672 748 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 SNPHO15079 494 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 HS6ST1O60243 411 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 REM1O75628 298 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 WISP2O76076 250 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 HMGN2P05204 90 aaKnown RBP14.55□□□□□ -0.08
UPF3A-208ENST00000484246 PGRP06401 933 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 LCN1P31025 176 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 S100A3P33764 101 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 RFC3P40938 356 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 PSMD4P55036 377 aaKnown RBP14.55□□□□□ -0.08
UPF3A-208ENST00000484246 AQP5P55064 265 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 KCNK10P57789 538 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 PPIAP62937 165 aaKnown RBP14.55□□□□□ -0.08
UPF3A-208ENST00000484246 PLGLB1Q02325 96 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 RBPJQ06330 500 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 DUSP5Q16690 384 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.55□□□□□ -0.08
UPF3A-208ENST00000484246 FNDC7Q5VTL7 733 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 SLC16A11Q8NCK7 471 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 FAM110BQ8TC76 370 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 MIPOL1Q8TD10 442 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 ADOQ96SZ5 270 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 EBF4Q9BQW3 602 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 OSBPL11Q9BXB4 747 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 UBQLN3Q9H347 655 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 PIGUQ9H490 435 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 METTL7AQ9H8H3 244 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 EQTNQ9NQ60 294 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 B4GALT7Q9UBV7 327 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 SNX8Q9Y5X2 465 aa14.55□□□□□ -0.08
UPF3A-208ENST00000484246 A0A1B0GVC2 190 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 SLC22A3O75751 556 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 KCNH1O95259 989 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 IL6P05231 212 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 NGFRP08138 427 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 ALOX5P09917 674 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 GABRA3P34903 492 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 ZFP36L2P47974 494 aaKnown RBP14.54□□□□□ -0.08
UPF3A-208ENST00000484246 MAN2A2P49641 1150 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 ATP4BP51164 291 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 PRKAG1P54619 331 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 SRSF1Q07955 248 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■□□□□ 11.2
UPF3A-208ENST00000484246 LASP1Q14847 261 aaKnown RBP14.54□□□□□ -0.08
UPF3A-208ENST00000484246 BICRALQ6AI39 1079 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 TIGD3Q6B0B8 471 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 DESI1Q6ICB0 168 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 SZRD1Q7Z422 152 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 WDR53Q7Z5U6 358 aaPredicted RBP14.54□□□□□ -0.08
UPF3A-208ENST00000484246 PACS2Q86VP3 889 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 MIER2Q8N344 545 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 FAM26EQ8N5C1 309 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 ACTRT3Q9BYD9 372 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 TSPAN10Q9H1Z9 355 aaPredicted RBP14.54□□□□□ -0.08
UPF3A-208ENST00000484246 ACKR4Q9NPB9 350 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 PCDHGB4Q9UN71 923 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 C15orf41Q9Y2V0 281 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 POLEQ07864 2286 aa14.54□□□□□ -0.08
UPF3A-208ENST00000484246 RNF103-CHMP3A0A140T963 221 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms