RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	C6orf163	Q5TEZ5	329 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	SLC25A25	Q6KCM7	469 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	XKRX	Q6PP77	449 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	C6orf89	Q6UWU4	347 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	NPSR1	Q6W5P4	371 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	GDF7	Q7Z4P5	450 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	SPPL2C	Q8IUH8	684 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	ANKS4B	Q8N8V4	417 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	HOXB13	Q92826	284 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	C16orf58	Q96GQ5	468 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	FRMD6	Q96NE9	622 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	GAL3ST4	Q96RP7	486 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	NXF5	Q9H1B4	397 aa	Known RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	DDX18	Q9NVP1	670 aa	Known RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	TMEM45A	Q9NWC5	275 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	TAS2R9	Q9NYW1	312 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	LRFN1	Q9P244	771 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	TRIM33	Q9UPN9	1127 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	CRYBG3	Q68DQ2	2970 aa		13.73	□□□□□ -0.21
NR1H3-222	ENST00000483882	C2orf92	A0A1B0GVN3	265 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	NR5A2	O00482	541 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	FCHO1	O14526	889 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	CFLAR	O15519	480 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	EMC8	O43402	210 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	ITGA10	O75578	1167 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SP1	P08047	785 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	HOXB9	P17482	250 aa	Predicted RBP	13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	CCT3	P49368	545 aa	Known RBP	13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	NR0B1	P51843	470 aa	Known RBP	13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	CORO7	P57737	925 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	PSG6	Q00889	435 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	MAPKAPK3	Q16644	382 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	GTDC1	Q4AE62	458 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	VPS26B	Q4G0F5	336 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	PAGE3	Q5JUK9	113 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SLC2A7	Q6PXP3	512 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	TMEM64	Q6YI46	380 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SLC29A4	Q7RTT9	530 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	NUP43	Q8NFH3	380 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	OR5L2	Q8NGL0	311 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	OR4A15	Q8NGL6	344 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SPDL1	Q96EA4	605 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	RASL10B	Q96S79	203 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	MYLK2	Q9H1R3	596 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SERHL2	Q9H4I8	314 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	GPATCH2	Q9NW75	528 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	SNX8	Q9Y5X2	465 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	ABCA12	Q86UK0	2595 aa		13.72	□□□□□ -0.21
NR1H3-222	ENST00000483882	ZNHIT1	O43257	154 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	SLC25A12	O75746	678 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	BCAS2	O75934	225 aa	Predicted RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	NEURL1	O76050	574 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	OR6B1	O95007	311 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	GSN	P06396	782 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	ACP2	P11117	423 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	ABO	P16442	354 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	DRD5	P21918	477 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	TRHR	P34981	398 aa	Predicted RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	PPIC	P45877	212 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	PRKAG1	P54619	331 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	NNAT	Q16517	81 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	MSANTD1	Q6ZTZ1	278 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	RETREG3	Q86VR2	466 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	OR4N2	Q8NGD1	307 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	OR5AK3P	Q8NH89	298 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	GTF2H4	Q92759	462 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	TP53INP1	Q96A56	240 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	BTBD9	Q96Q07	612 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	LMF2	Q9BU23	707 aa	Known RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	PAIP1	Q9H074	479 aa	Known RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	NEUROD4	Q9HD90	331 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	SLAMF8	Q9P0V8	285 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	ARMCX1	Q9P291	453 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	PRODH2	Q9UF12	536 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	ZNF835	Q9Y2P0	537 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	YARS2	Q9Y2Z4	477 aa	Known RBP	13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	MEMO1	Q9Y316	297 aa		13.71	□□□□□ -0.21
NR1H3-222	ENST00000483882	CCDC154	A6NI56	674 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	FBP2	O00757	339 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	ASNA1	O43681	348 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	COQ9	O75208	318 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	HMGN2	P05204	90 aa	Known RBP	13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	ZNF24	P17028	368 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	SOX3	P41225	446 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	CYB561	P49447	251 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	HSF1	Q00613	529 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	ZNF791	Q3KP31	576 aa	Predicted RBP	13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	DESI1	Q6ICB0	168 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	MFSD12	Q6NUT3	480 aa		13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882		Q6ZPB1	254 aa	Predicted RBP	13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	YTHDF3	Q7Z739	585 aa	Known RBP	13.7	□□□□□ -0.22
NR1H3-222	ENST00000483882	MTDH	Q86UE4	582 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms