RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 FGD3Q5JSP0 725 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 SNAP47Q5SQN1 464 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM236Q5W0B7 351 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 XAF1Q6GPH4 301 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 TYW3Q6IPR3 259 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZC3H14Q6PJT7 736 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 C16orf62Q7Z3J2 963 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 ENTHD1Q8IYW4 607 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 SAMD14Q8IZD0 417 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 BBS10Q8TAM1 723 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 PITX2Q99697 317 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 FUZQ9BT04 418 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 POLR1BQ9H9Y6 1135 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRMT8Q9NR22 394 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 TUBA8Q9NY65 449 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 PTGFRNQ9P2B2 879 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 KCNE5Q9UJ90 142 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAU2Q9Y6X3 613 aa8.25□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCNB2O95067 398 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CBX7O95931 251 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 SP9P0CG40 484 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAOAP21397 527 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 VAMP1P23763 118 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 PCSK6P29122 969 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 TRHRP34981 398 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAP3K8P41279 467 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 IL18R1Q13478 541 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF311Q5JNZ3 666 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 PMS2CLQ68D20 193 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 KLHL17Q6TDP4 642 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMPRSS9Q7Z410 1059 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 RASSF5Q8WWW0 418 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARSGQ96EG1 525 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 SDF2Q99470 211 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ELF4Q99607 663 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 BTBD2Q9BX70 525 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 YTHDF1Q9BYJ9 559 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 LIN28AQ9H9Z2 209 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 PDE7BQ9NP56 450 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 EPHA6Q9UF33 1036 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 PLCL2Q9UPR0 1127 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 LIPT1Q9Y234 373 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 NTNG1Q9Y2I2 539 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 SPACA6W5XKT8 324 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCDC160A6NGH7 325 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 DUXAA6NLW8 204 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 A8MU76 341 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 AGRPO00253 132 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 BCAS1O75363 584 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ANGPTL1O95841 491 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 H1F0P07305 194 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ANXA8P13928 327 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 GNSP15586 552 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 GLB1P16278 677 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CD1CP29017 333 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ANXA11P50995 505 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 FAM53BQ14153 422 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAD2L1BPQ15013 274 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 RBM48Q5RL73 367 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF773Q6PK81 442 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ASCL5Q7RTU5 278 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 MEX3DQ86XN8 651 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCDC103Q8IW40 242 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 SPARTQ8N0X7 666 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 TAGAPQ8N103 731 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR52R1Q8NGF1 315 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 GAB3Q8WWW8 586 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 PIGKQ92643 395 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 MMABQ96EY8 250 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZDHHC12Q96GR4 267 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPA33Q99795 319 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 NUDT22Q9BRQ3 303 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 RAB33BQ9H082 229 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CXorf21Q9HAI6 301 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CAPN10Q9HC96 672 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 CDC14AQ9UNH5 594 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 DTX4Q9Y2E6 619 aa8.24□□□□□ -1.09
CDC42SE1-204ENST00000483763 TP53BP1Q12888 1972 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 A0A087WV62 115 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 NPIPA5A0A0B4J1W7 369 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 GXYLT2A0PJZ3 443 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 NPIPA7E9PJI5 369 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PEX12O00623 359 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 NSA2O95478 260 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 THY1P04216 161 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC35E2P0CK97 266 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 NPIPA8P0DM63 369 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 FOLR1P15328 257 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 CHMP24386 653 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 SSTR4P31391 388 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC5A2P31639 672 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR1D4P47884 311 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 AVPR1BP47901 424 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PLAURQ03405 335 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 GNA13Q14344 377 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms