RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 GMFGO60234 142 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 TSPAN2O60636 221 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SMPD2O60906 423 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SBK3P0C264 359 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 CT45A8P0DMV1 189 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 CT45A9P0DMV2 189 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 DPP4P27487 766 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 IL12BP29460 328 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SRD5A2P31213 254 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 MAGEA12P43365 314 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 HTR6P50406 440 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 DIO3P55073 304 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 ZNF155Q12901 538 aaPredicted RBP12.57□□□□□ -0.4
VARS-226ENST00000483275 CT45A2Q5DJT8 189 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SH2D4BQ5SQS7 431 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 C8orf74Q6P047 294 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 METTL2BQ6P1Q9 378 aaKnown RBP12.57□□□□□ -0.4
VARS-226ENST00000483275 ZNF474Q6S9Z5 364 aaPredicted RBP12.57□□□□□ -0.4
VARS-226ENST00000483275 BTLAQ7Z6A9 289 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 PRIMA1Q86XR5 153 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 P3H2Q8IVL5 708 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SLC44A2Q8IWA5 706 aaPredicted RBP12.57□□□□□ -0.4
VARS-226ENST00000483275 MNS1Q8NEH6 495 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 TRPC4APQ8TEL6 797 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 FIG4Q92562 907 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 COX4I2Q96KJ9 171 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 VSTM2LQ96N03 204 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 BTBD9Q96Q07 612 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 PIGMQ9H3S5 423 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 FOLH1BQ9HBA9 442 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 PRODH2Q9UF12 536 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 DLGAP4Q9Y2H0 992 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SHISA8B8ZZ34 492 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 MANBAO00462 879 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
VARS-226ENST00000483275 HCRTR2O43614 444 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 PCDH7O60245 1069 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 GUCY1B2O75343 617 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 OTCP00480 354 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 RBP1P09455 135 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 GAS1P54826 345 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 CLDN15P56746 228 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 RAE1P78406 368 aaKnown RBP12.56□□□□□ -0.4
VARS-226ENST00000483275 PRSS53Q2L4Q9 553 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 SHEQ5VZ18 495 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 ANKRD34AQ69YU3 496 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 AAGABQ6PD74 315 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 SCIMPQ6UWF3 145 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 ZNF572Q7Z3I7 529 aaPredicted RBP12.56□□□□□ -0.4
VARS-226ENST00000483275 OR7G2Q8NG99 324 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 OR4K17Q8NGC6 315 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 CDC26Q8NHZ8 85 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 TMCO6Q96DC7 493 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 PGM2Q96G03 612 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 SLC35A4Q96G79 324 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 ZNF845Q96IR2 970 aaPredicted RBP12.56□□□□□ -0.4
VARS-226ENST00000483275 UCN2Q96RP3 112 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 PAFAH2Q99487 392 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 CCL19Q99731 98 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 FAIM2Q9BWQ8 316 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 ACPTQ9BZG2 426 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 ACBD3Q9H3P7 528 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 DSN1Q9H410 356 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 PPP4R1LQ9P1A2 415 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 FBN1P35555 2871 aaKnown RBP12.56□□□□□ -0.4
VARS-226ENST00000483275 RTTNQ86VV8 2226 aa12.56□□□□□ -0.4
VARS-226ENST00000483275 TRIM49D1C9J1S8 452 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 GOSR1O95249 250 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 INHBAP08476 426 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 KRT20P35900 424 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 CD79BP40259 229 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 KIR2DL2P43627 348 aaPredicted RBP12.55□□□□□ -0.4
VARS-226ENST00000483275 SUCLG1P53597 346 aaKnown RBP12.55□□□□□ -0.4
VARS-226ENST00000483275 ERCC6LQ2NKX8 1250 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 TEX35Q5T0J7 233 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 YTHDF3Q7Z739 585 aaKnown RBP12.55□□□□□ -0.4
VARS-226ENST00000483275 FNDC9Q8TBE3 224 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 ZNF675Q8TD23 568 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 NUDT8Q8WV74 236 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 MDFIQ99750 246 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 PINK1Q9BXM7 581 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 CDC42EP4Q9H3Q1 356 aaKnown RBP12.55□□□□□ -0.4
VARS-226ENST00000483275 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 MED11Q9P086 117 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 SENP1Q9P0U3 644 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 PSME2Q9UL46 239 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 OR10H1Q9Y4A9 318 aa12.55□□□□□ -0.4
VARS-226ENST00000483275 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
VARS-226ENST00000483275 STAB1Q9NY15 2570 aa12.54□□□□□ -0.4
VARS-226ENST00000483275 GNG14A0A1W2PPG7 69 aa12.54□□□□□ -0.4
VARS-226ENST00000483275 POC1B-GALNT4F8VUJ3 575 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms