RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 BEND6Q5SZJ8 279 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 SERINC5Q86VE9 423 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 ABCA7Q8IZY2 2146 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 TESK2Q96S53 571 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 CARD6Q9BX69 1037 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 MEPEQ9NQ76 525 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 CUTCQ9NTM9 273 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 FAM120CQ9NX05 1096 aaKnown RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 IMPAD1Q9NX62 359 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 KLRF1Q9NZS2 232 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 NOTCH3Q9UM47 2321 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 RGSL1A5PLK6 1076 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 TRIM49BA6NDI0 452 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 ERI2A8K979 691 aaKnown RBP4.31□□□□□ -1.72
SF3B1-210ENST00000482158 TM9SF1O15321 606 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 CHADO15335 359 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 TOM1L1O75674 476 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 RHBDL1O75783 438 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 LAMP1P11279 417 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 IDSP22304 550 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 ARHGDIBP52566 201 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 TFDP1Q14186 410 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 RAB35Q15286 201 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 TIMM50Q3ZCQ8 353 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 SLC39A4Q6P5W5 647 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 GCNT7Q6ZNI0 430 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 VPS36Q86VN1 386 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 P2RY8Q86VZ1 359 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 LYG1Q8N1E2 194 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 RFESDQ8TAC1 157 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 ART4Q93070 314 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 GPN2Q9H9Y4 310 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-210ENST00000482158 DUS2Q9NX74 493 aaKnown RBP4.31□□□□□ -1.72
SF3B1-210ENST00000482158 ZNF107Q9UII5 783 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-210ENST00000482158 MGAT4BQ9UQ53 548 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 NTNG1Q9Y2I2 539 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 EXOSC1Q9Y3B2 195 aaKnown RBP4.31□□□□□ -1.72
SF3B1-210ENST00000482158 MMP24Q9Y5R2 645 aa4.31□□□□□ -1.72
SF3B1-210ENST00000482158 B3GALNT1O75752 331 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 GJB5O95377 273 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 CA3P07451 260 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 ANXA4P09525 319 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-210ENST00000482158 ALPIP09923 528 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 ALDH3B2P48448 385 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 RPL34P49207 117 aaKnown RBP4.3□□□□□ -1.72
SF3B1-210ENST00000482158 RPS6P62753 249 aaKnown RBP4.3□□□□□ -1.72
SF3B1-210ENST00000482158 EXOSC2Q13868 293 aaKnown RBP4.3□□□□□ -1.72
SF3B1-210ENST00000482158 TMEM52BQ4KMG9 183 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 BTNL3Q6UXE8 466 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 Q6ZR54 194 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 Q7L0L9 218 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 ERASQ7Z444 233 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 UNC5CLQ8IV45 518 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 LINC00612Q8N6U2 182 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 SELENOMQ8WWX9 145 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 PNNQ9H307 717 aaKnown RBP4.3□□□□□ -1.72
SF3B1-210ENST00000482158 VAT1LQ9HCJ6 419 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
SF3B1-210ENST00000482158 ATP8B3O60423 1300 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 TRBV7-9A0A0J9YWB2 115 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 ANKRD30BLA7E2S9 258 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 VPS26AO75436 327 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 PRAMEF12O95522 483 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 THY1P04216 161 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 GIG44P09565 113 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-210ENST00000482158 FASP25445 335 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 ADRA1AP35348 466 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 METAP1P53582 386 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 HSF2Q03933 536 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 PDZK1IP1Q13113 114 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 SLC10A1Q14973 349 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 TGIF1Q15583 401 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 ATAD3CQ5T2N8 411 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 CGB2Q6NT52 195 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 LPCAT2Q7L5N7 544 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 LHFPL4Q7Z7J7 247 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 KLHL30-AS1Q8NEE0 82 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 HCAR1Q9BXC0 346 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 RPAP3Q9H6T3 665 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-210ENST00000482158 SLC7A10Q9NS82 523 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 BARX2Q9UMQ3 279 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-210ENST00000482158 DUSP12Q9UNI6 340 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 NAALAD2Q9Y3Q0 740 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.29□□□□□ -1.72
SF3B1-210ENST00000482158 AGRNO00468 2067 aa4.29□□□□□ -1.72
SF3B1-210ENST00000482158 TP53BP1Q12888 1972 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-210ENST00000482158 FRG2CA6NGY1 282 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 WASHC1A8K0Z3 465 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 WASH3PC4AMC7 463 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 SLC17A2O00624 439 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 PHOX2AO14813 284 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 JCHAINP01591 159 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 UMPSP11172 480 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 ERVPABLB-1P60509 514 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 CXCL6P80162 114 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms