RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF623O75123 536 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 NDUFA10O95299 355 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CBSLP0DN79 551 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF18P17022 549 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 BMP7P18075 431 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CD1BP29016 333 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 HNRNPH1P31943 449 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 CBSP35520 551 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 NUP62P37198 522 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 HMGCS2P54868 508 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 OC90Q02509 493 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 HNRNPA1L2Q32P51 320 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF311Q5JNZ3 666 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PCSK4Q6UW60 755 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 KIAA1328Q86T90 577 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PATL1Q86TB9 770 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ABHD11Q8NFV4 315 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 TAAR8Q969N4 342 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 RITA1Q96K30 269 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 C10orf90Q96M02 699 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ALG8Q9BVK2 526 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 AUNIPQ9H7T9 357 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 GALNT9Q9HCQ5 603 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 LYRM4Q9HD34 91 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 SPHK1Q9NYA1 384 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PIPOXQ9P0Z9 390 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 SLC22A14Q9Y267 594 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 EVPLQ92817 2033 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 A0A096LPK6 155 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 A8MUI8 341 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 H3BMH7 237 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 TMEM178BH3BS89 294 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 YKT6O15498 198 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 FAM20BO75063 409 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 SCELO95171 688 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 EPOP01588 193 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 C9P02748 559 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 OPN1LWP04000 364 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 VTNP04004 478 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CTSAP10619 480 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 MAGEA8P43361 318 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 GRIK2Q13002 908 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF177Q13360 481 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 CHI3L2Q15782 390 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF74Q16587 644 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 IL23RQ5VWK5 629 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 SEL1L3Q68CR1 1132 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 OR2A2Q6IF42 318 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 TMEM53Q6P2H8 277 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ALKAL1Q6UXT8 129 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 DPY19L4Q7Z388 723 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 NANOGNBQ7Z5D8 188 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 POLNQ7Z5Q5 900 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PHLDB2Q86SQ0 1253 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 COMTD1Q86VU5 262 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 FAM131BQ86XD5 332 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 EFCAB13Q8IY85 973 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 UBE2J2Q8N2K1 259 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 GPR137CQ8N3F9 429 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 GCSAMQ8N6F7 178 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF548Q8NEK5 533 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 RAB1CQ92928 201 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ADIPOR1Q96A54 375 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 HAVCR1Q96D42 359 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 HARBI1Q96MB7 349 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 TSSK3Q96PN8 268 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 VN1R1Q9GZP7 353 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 MAP6D1Q9H9H5 199 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 KLHL13Q9P2N7 655 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 RNF14Q9UBS8 474 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 SEC14L3Q9UDX4 400 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 DIMT1Q9UNQ2 313 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 RBMX2Q9Y388 322 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ATG2BQ96BY7 2078 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 E5RGE8 158 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 WWP2O00308 870 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 P2RY10O00398 339 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZBTB5O15062 677 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 KCNN4O15554 427 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PLAUP00749 431 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CCDC172P0C7W6 258 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 HOXB8P17481 243 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 CYP2B6P20813 491 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 COMTP21964 271 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 CBLP22681 906 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 DPP4P27487 766 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ARRB1P49407 418 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ATP5IP56385 69 aaPredicted RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 EXOSC2Q13868 293 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF284Q2VY69 593 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 TMEM139Q8IV31 216 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 PALM2Q8IXS6 379 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 OR1L4Q8NGR5 311 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 OR13F1Q8NGS4 319 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 GPX8Q8TED1 209 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ZNF473Q8WTR7 871 aaKnown RBP2.98□□□□□ -1.93
SMC6-208ENST00000481708 SLCO2A1Q92959 643 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 ALS2CR12Q96Q35 445 aa2.98□□□□□ -1.93
SMC6-208ENST00000481708 VPS35Q96QK1 796 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms