RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ARMC8Q8IUR7 673 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 ARMC10Q8N2F6 343 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 C10orf111Q8N326 155 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 APCDD1LQ8NCL9 501 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 FAM156AQ8NDB6 213 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 PAPD5Q8NDF8 572 aaKnown RBP9.43□□□□□ -0.9
USP39-215ENST00000481409 OR5D16Q8NGK9 328 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 NFKBIDQ8NI38 313 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 FAM110BQ8TC76 370 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 GPR151Q8TDV0 419 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 ELP5Q8TE02 316 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 SLC26A7Q8TE54 656 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 C16orf58Q96GQ5 468 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 RSRC1Q96IZ7 334 aaKnown RBP9.43□□□□□ -0.9
USP39-215ENST00000481409 IMMP1LQ96LU5 166 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 TREX2Q9BQ50 279 aaPredicted RBP9.43□□□□□ -0.9
USP39-215ENST00000481409 ZNF350Q9GZX5 532 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 PIF1Q9H611 641 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 CCM2LQ9NUG4 571 aaPredicted RBP9.43□□□□□ -0.9
USP39-215ENST00000481409 ARMC1Q9NVT9 282 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 PACSIN3Q9UKS6 424 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 BAG5Q9UL15 447 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 CBLCQ9ULV8 474 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 ZNF232Q9UNY5 417 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 GPC6Q9Y625 555 aaPredicted RBP9.43□□□□□ -0.9
USP39-215ENST00000481409 AK5Q9Y6K8 562 aa9.43□□□□□ -0.9
USP39-215ENST00000481409 LOC101059948A0A1B0GTJ6 334 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 MYOCOSA0A1B0GUC4 107 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 TCRBV5S2A0A599 114 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 DHRS12A0PJE2 317 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 A8MUA0 341 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 SYT5O00445 386 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 SOCS6O14544 535 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 HNRNPRO43390 633 aaKnown RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 SUV39H1O43463 412 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 SORBS2O94875 1100 aaKnown RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 THBS1P07996 1170 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 NUDT7P0C024 238 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CT45A8P0DMV1 189 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CT45A9P0DMV2 189 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 RAP2AP10114 183 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 COX6A1P12074 109 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 RPS26P62854 115 aaKnown RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 RNF4P78317 190 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CHRNB3Q05901 458 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 DUSP8Q13202 625 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CCNIQ14094 377 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 GK3PQ14409 553 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 GPAT3Q53EU6 434 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CT45A2Q5DJT8 189 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 FAAH2Q6GMR7 532 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 JMJD6Q6NYC1 403 aaPredicted RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 KIRREL2Q6UWL6 708 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 TAGAPQ8N103 731 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 ZNF619Q8N2I2 560 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 ZNF441Q8N8Z8 693 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 ZNF527Q8NB42 609 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 OR11G2Q8NGC1 345 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 THAP4Q8WY91 577 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 CDS1Q92903 461 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 MAL2Q969L2 176 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 SLC35B4Q969S0 331 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 MARVELD3Q96A59 401 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 FAM122AQ96E09 287 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 PYURFQ96I23 114 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 FER1L6-AS2Q96M78 137 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 SDF2Q99470 211 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 YIPF4Q9BSR8 244 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 DOHHQ9BU89 302 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 NUDT9Q9BW91 350 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 WWTR1Q9GZV5 400 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 OCEL1Q9H607 264 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 GPN2Q9H9Y4 310 aaPredicted RBP9.42□□□□□ -0.9
USP39-215ENST00000481409 DKK4Q9UBT3 224 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 ANAPC2Q9UJX6 822 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 WDR45Q9Y484 360 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 OR10H1Q9Y4A9 318 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 WDR87Q6ZQQ6 2873 aa9.42□□□□□ -0.9
USP39-215ENST00000481409 PTPRZ1P23471 2315 aaPredicted RBP9.41□□□□□ -0.9
USP39-215ENST00000481409 TRABD2BA6NFA1 517 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 M0QX08 132 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 HRKO00198 91 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 KIAA0513O60268 411 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 DPM1O60762 260 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 ENTPD5O75356 428 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 KCNK2O95069 426 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 MFN2O95140 757 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 H6PDO95479 791 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 IL33O95760 270 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 SERPINA1P01009 418 aa9.41□□□□□ -0.9
USP39-215ENST00000481409 DBIP07108 87 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms