RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 FNDC7Q5VTL7 733 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 OR2A2Q6IF42 318 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 ZCCHC12Q6PEW1 402 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 TMEM64Q6YI46 380 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 CHMP1BQ7LBR1 199 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 CDH24Q86UP0 819 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 GSPT2Q8IYD1 628 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 RPRMLQ8N4K4 120 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 OR4K17Q8NGC6 315 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCM2-213ENST00000480658 EPS8L3Q8TE67 593 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 DOK4Q8TEW6 326 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 PPP3R2Q96LZ3 170 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 ZIM3Q96PE6 472 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 KCNA7Q96RP8 456 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 ADOQ96SZ5 270 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 PRPF18Q99633 342 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 SFXN3Q9BWM7 321 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 UGT2B28Q9BY64 529 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 NPDC1Q9NQX5 325 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 ACSS1Q9NUB1 689 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 ATAD3AQ9NVI7 634 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 FAM120CQ9NX05 1096 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 TAS2R10Q9NYW0 307 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 PPP4R1LQ9P1A2 415 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 CBLCQ9ULV8 474 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 POLR3HQ9Y535 204 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 PHF3Q92576 2039 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 TSPAN2O60636 221 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 LYPLA1O75608 230 aaPredicted RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 LRATO95237 230 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 PSMG1O95456 288 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 JUNP05412 331 aaKnown RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 CRHP06850 196 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 KRT16P08779 473 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 CHN1P15882 459 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 BMP7P18075 431 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 CTSSP25774 331 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 MC3RP41968 323 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 KIR2DL3P43628 341 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 DIO3P55073 304 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 FOXA1P55317 472 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 PCLAFQ15004 111 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 GLYR1Q49A26 553 aaPredicted RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 KANK2Q63ZY3 851 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 BICRALQ6AI39 1079 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 WDR93Q6P2C0 686 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 ARSKQ6UWY0 536 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 TMEM107Q6UX40 140 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 TMEM200AQ86VY9 491 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 MISPQ8IVT2 679 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 C10orf107Q8IVU9 208 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 SLC44A2Q8IWA5 706 aaPredicted RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 ZNF295-AS1Q8N0V1 137 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 MMP21Q8N119 569 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 C4orf33Q8N1A6 199 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 CDRT4Q8N9R6 151 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 OR7G2Q8NG99 324 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 FAM222BQ8WU58 562 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 KAT2AQ92830 837 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 NINJ1Q92982 152 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 RNASE6Q93091 150 aaKnown RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 WNT2BQ93097 391 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 PPCDCQ96CD2 204 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 ELP4Q96EB1 424 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 SFXN2Q96NB2 322 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 AMDHD1Q96NU7 426 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 MS4A4EQ96PG1 132 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 TRIB1Q96RU8 372 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 NODALQ96S42 347 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 LMF2Q9BU23 707 aaKnown RBP10.43□□□□□ -0.74
CCM2-213ENST00000480658 UCK2Q9BZX2 261 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 PIGMQ9H3S5 423 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 GALNT9Q9HCQ5 603 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 TNFRSF10DQ9UBN6 386 aa10.43□□□□□ -0.74
CCM2-213ENST00000480658 IL33O95760 270 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PRPS2P11908 318 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 FCGR2AP12318 317 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PEPDP12955 493 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 CD1EP15812 388 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 GRK2P25098 689 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 ADH7P40394 386 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 SERPINB4P48594 390 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PCYT1AP49585 367 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 DGKQP52824 942 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 GFRA1P56159 465 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 CORO7P57737 925 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PSG6Q00889 435 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 MLC1Q15049 377 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 FLYWCH1Q4VC44 716 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 ATP6AP1LQ52LC2 224 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 WIPI1Q5MNZ9 446 aaPredicted RBP10.42□□□□□ -0.74
CCM2-213ENST00000480658 BHLHB9Q6PI77 547 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 TRABD2AQ86V40 505 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 DDIASQ8IXT1 998 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 BANPQ8N9N5 519 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 WDSUB1Q8N9V3 476 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms