RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 IL12BP29460 328 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 SSTR1P30872 391 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 ACVR1BP36896 505 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 GP5P40197 560 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 MAPK12P53778 367 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 GAS1P54826 345 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
VIM-204ENST00000478746 GTF2H2Q13888 395 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 PFKFB4Q16877 469 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 GTF2H2CQ6P1K8 395 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 LARP4Q71RC2 724 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIM-204ENST00000478746 L3MBTL4Q8NA19 623 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 PYROXD1Q8WU10 500 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 STMN4Q9H169 189 aaPredicted RBP15.42■□□□□ 0.06
VIM-204ENST00000478746 SLCO5A1Q9H2Y9 848 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 FANCFQ9NPI8 374 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 PPP4R1LQ9P1A2 415 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 EMC9Q9Y3B6 208 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 H3BML4 177 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 LINC01387J3KSC0 135 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 CLDN9O95484 217 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 FAM157CP0CG43 387 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 GFAPP14136 432 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 SPRP35270 261 aaPredicted RBP15.41■□□□□ 0.06
VIM-204ENST00000478746 PNLIPRP2P54317 469 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 CLDN20P56880 219 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 DR1Q01658 176 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 LTB4RQ15722 352 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 SGCBQ16585 318 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 ADAM5Q6NVV9 412 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 GOLGA7Q7Z5G4 137 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 OR5M1Q8NGP8 315 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 TRPC4APQ8TEL6 797 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 GFM2Q969S9 779 aaKnown RBP15.41■□□□□ 0.06
VIM-204ENST00000478746 NXNL1Q96CM4 212 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 KLHL29Q96CT2 875 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 MRPL1Q9BYD6 325 aaKnown RBP15.41■□□□□ 0.06
VIM-204ENST00000478746 PRRG4Q9BZD6 226 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 TRIM31Q9BZY9 425 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
VIM-204ENST00000478746 C17orf51A8MQB3 221 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 TP73O15350 636 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 BCAS2O75934 225 aaPredicted RBP15.4■□□□□ 0.06
VIM-204ENST00000478746 AQP8O94778 261 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CT45A8P0DMV1 189 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CT45A9P0DMV2 189 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 FCGR2AP12318 317 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CRABP2P29373 138 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CDKN1AP38936 164 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 ARL1P40616 181 aaPredicted RBP15.4■□□□□ 0.06
VIM-204ENST00000478746 ALDH18A1P54886 795 aaKnown RBP15.4■□□□□ 0.06
VIM-204ENST00000478746 CTBP2P56545 445 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 MRPS35P82673 323 aaKnown RBP15.4■□□□□ 0.06
VIM-204ENST00000478746 DUSP2Q05923 314 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CT45A2Q5DJT8 189 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 GRTP1Q5TC63 336 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 ALKBH2Q6NS38 261 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 FAM180BQ6P0A1 224 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 CMC1Q7Z7K0 106 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 KLHL7Q8IXQ5 586 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 FADS6Q8N9I5 356 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 OR2M3Q8NG83 312 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 OR6K3Q8NGY3 331 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 LILRB1Q8NHL6 650 aaPredicted RBP15.4■□□□□ 0.06
VIM-204ENST00000478746 RAB3IL1Q8TBN0 382 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 RNF138Q8WVD3 245 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 ATP6V1E2Q96A05 226 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 BTBD9Q96Q07 612 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 ACTR6Q9GZN1 396 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 MED11Q9P086 117 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 LIPT1Q9Y234 373 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 ZNF780BQ9Y6R6 833 aa15.4■□□□□ 0.06
VIM-204ENST00000478746 PCNX3Q9H6A9 2034 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 OR2M5A3KFT3 312 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 HAX1O00165 279 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 ADAM11O75078 769 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 PLGP00747 810 aaPredicted RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 SOD3P08294 240 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 IL11P20809 199 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CORO7P57737 925 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 MRPS22P82650 360 aaKnown RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 GANABQ14697 944 aaKnown RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 TTC19Q6DKK2 380 aaPredicted RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 PPP4R4Q6NUP7 873 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 BEND4Q6ZU67 534 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CYS1Q717R9 158 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 METTL4Q8N3J2 472 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 METTL25Q8N6Q8 603 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 RHEBL1Q8TAI7 183 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 SMAP2Q8WU79 429 aaPredicted RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 EFHD2Q96C19 240 aaPredicted RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 TM4SF18Q96CE8 201 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CNRIP1Q96F85 164 aaPredicted RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 ZNF681Q96N22 645 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 CDK15Q96Q40 435 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 TACO1Q9BSH4 297 aaKnown RBP15.39■□□□□ 0.05
VIM-204ENST00000478746 OR10A4Q9H209 315 aa15.39■□□□□ 0.05
VIM-204ENST00000478746 PTGES2Q9H7Z7 377 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms