RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GFM2Q969S9 779 aaKnown RBP18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 CPNE1Q99829 537 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 C19orf24Q9BVV8 132 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 STMN4Q9H169 189 aaPredicted RBP18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 NMRAL1Q9HBL8 299 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 FANCFQ9NPI8 374 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 PPP4R1LQ9P1A2 415 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 TXNDC16Q9P2K2 825 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 LIPT1Q9Y234 373 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 RNF115Q9Y4L5 304 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 PCDHA9Q9Y5H5 950 aa18.15■□□□□ 0.5
PDLIM1-202ENST00000477757 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.15■□□□□ 0.54e-6■■□□□ 13.3
PDLIM1-202ENST00000477757 UQCRHLA0A096LP55 91 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 C1orf226A1L170 272 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 CXorf49A8MYA2 514 aaPredicted RBP18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 TP73O15350 636 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 ERAL1O75616 437 aaKnown RBP18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 KLK1P06870 262 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 CT45A8P0DMV1 189 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 CT45A9P0DMV2 189 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 HK1P19367 917 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 IL12BP29460 328 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 PSPHP78330 225 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 DUSP2Q05923 314 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 SLMAPQ14BN4 828 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 LTB4RQ15722 352 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 TRMT12Q53H54 448 aaKnown RBP18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 CT45A2Q5DJT8 189 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 LARP4Q71RC2 724 aaKnown RBP eCLIP18.14■□□□□ 0.499e-10■■■■■ 35.7
PDLIM1-202ENST00000477757 OR2M3Q8NG83 312 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 OSBPL9Q96SU4 736 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 ZBTB26Q9HCK0 441 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 WHRNQ9P202 907 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 RNF11Q9Y3C5 154 aa18.14■□□□□ 0.49
PDLIM1-202ENST00000477757 PRR14LQ5THK1 2151 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 OR2M5A3KFT3 312 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 H3BML4 177 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 SS18L1O75177 396 aaPredicted RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 SEC31AO94979 1220 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 PSMB1P20618 241 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 KRT20P35900 424 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 GP5P40197 560 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 MAPK12P53778 367 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 CORO7P57737 925 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 RPS3AP61247 264 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 MRPS35P82673 323 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 CCNYL2Q5T2Q4 361 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 PAGE2Q7Z2X7 111 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 SMAP2Q8WU79 429 aaPredicted RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 KLHL29Q96CT2 875 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 GMPPAQ96IJ6 420 aaPredicted RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 MRPL1Q9BYD6 325 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 DSN1Q9H410 356 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 LRTM1Q9HBL6 345 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 BARX1Q9HBU1 254 aaPredicted RBP18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 SAYSD1Q9NPB0 183 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 TMEM160Q9NX00 188 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 GPR52Q9Y2T5 361 aa18.13■□□□□ 0.49
PDLIM1-202ENST00000477757 A0A096LNT2 108 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 SYCE1LA8MT33 242 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 GUCY1B2O75343 617 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 IL11P20809 199 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 THBS2P35442 1172 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 PIK3CGP48736 1102 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 PNLIPRP2P54317 469 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 CMC1Q7Z7K0 106 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 TBC1D1Q86TI0 1168 aaPredicted RBP18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 ZBED8Q8IZ13 594 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 ZNF675Q8TD23 568 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 CDKL2Q92772 493 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 CNRIP1Q96F85 164 aaPredicted RBP18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 HS6ST2Q96MM7 605 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 TACO1Q9BSH4 297 aaKnown RBP18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 IPPKQ9H8X2 491 aa18.12■□□□□ 0.49
PDLIM1-202ENST00000477757 A0A1W2PP18 115 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 CLOCKO15516 846 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 SCO2O43819 266 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 GPRIN2O60269 458 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 NDUFS7O75251 213 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 PLGP00747 810 aaPredicted RBP18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 LTA4HP09960 611 aaKnown RBP18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 EVI2BP34910 448 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 SLC6A8P48029 635 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 CTBP2P56545 445 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 MRPS22P82650 360 aaKnown RBP18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 GTF2H2Q13888 395 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 GTF2H2CQ6P1K8 395 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 NPSR1Q6W5P4 371 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 BEND4Q6ZU67 534 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 GOLGA7Q7Z5G4 137 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 GGNQ86UU5 652 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 OR5M1Q8NGP8 315 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 TRPC4APQ8TEL6 797 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 ERP27Q96DN0 273 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 C11orf24Q96F05 449 aaPredicted RBP18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 VSTM2LQ96N03 204 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 ZNF681Q96N22 645 aa18.11■□□□□ 0.49
PDLIM1-202ENST00000477757 LPAR3Q9UBY5 353 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms