RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ZNF473Q8WTR7 871 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 NTN5Q8WTR8 489 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 SLC13A3Q8WWT9 602 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 EXT2Q93063 718 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 MR1Q95460 341 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 RERGQ96A58 199 aaPredicted RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 MS4A6EQ96DS6 147 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PGM2Q96G03 612 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 APOPT1Q96IL0 206 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 RITA1Q96K30 269 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CATSPER2Q96P56 530 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 QRFPRQ96P65 431 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 ZNF382Q96SR6 550 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 MS4A8Q9BY19 250 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 CLK4Q9HAZ1 481 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 MLXIPLQ9NP71 852 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 STARD5Q9NSY2 213 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TXLNGQ9NUQ3 528 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 C14orf105Q9NVL8 296 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 PSD3Q9NYI0 1048 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 SENP1Q9P0U3 644 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 TBK1Q9UHD2 729 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 DCDC2Q9UHG0 476 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 FARSAQ9Y285 508 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 CLDN16Q9Y5I7 305 aa4.89□□□□□ -1.63
VPS45-207ENST00000477558 MRPS18BQ9Y676 258 aaKnown RBP4.89□□□□□ -1.63
VPS45-207ENST00000477558 UBR5O95071 2799 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 LOC102723996A0A087X1L8 192 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IGKV3D-11A0A0A0MRZ8 115 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 A0A0A6YYC8 382 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 C9J4A7 227 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 H7C1Q1 480 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 I3L1I5 382 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 GOLGA8RI6L899 631 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 CLIC1O00299 241 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 PPP6CO00743 305 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 CLGNO14967 610 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 NKX2-8O15522 239 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 PRPF4O43172 522 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS45-207ENST00000477558 NDUFS4O43181 175 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR1F1O43749 312 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 SMIM24O75264 130 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 SKAP2O75563 359 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 DHRS4L1P0CG22 281 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ALOX12P18054 663 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IL1RNP18510 177 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IMPDH1P20839 514 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IL10P22301 178 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 MMP11P24347 488 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ATP5F1P24539 256 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 CXCR2P25025 360 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 EEF1DP29692 281 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 GALNSP34059 522 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 TSFMP43897 325 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR1D4P47884 311 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 FOXL2P58012 376 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 RPS18P62269 152 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 TXNL4AP83876 142 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 MC1RQ01726 317 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IRF8Q02556 426 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 LCP2Q13094 533 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 PCLAFQ15004 111 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ZRSR2Q15696 482 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 CCDC153Q494R4 210 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 UNC50Q53HI1 259 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 XKR6Q5GH73 641 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 C1orf189Q5VU69 101 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 SUMO4Q6EEV6 95 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 CCDC144NLQ6NUI1 221 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 MED27Q6P2C8 311 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 TMEM205Q6UW68 189 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ZNF782Q6ZMW2 699 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 ZNF793Q6ZN11 406 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 RNF165Q6ZSG1 346 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ADCK2Q7Z695 626 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 SLC22A9Q8IVM8 553 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 C4orf33Q8N1A6 199 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 TBC1D19Q8N5T2 526 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 TEX9Q8N6V9 391 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 PNLDC1Q8NA58 520 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR2L5Q8NG80 312 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR7G3Q8NG95 312 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR9A4Q8NGU2 314 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 STT3BQ8TCJ2 826 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 THAP4Q8WY91 577 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 DPF1Q92782 380 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 N4BP2L2Q92802 583 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 UBE2E3Q969T4 207 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 CCDC126Q96EE4 140 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 C11orf24Q96F05 449 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 ZIM3Q96PE6 472 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 OR1F2PQ96R84 312 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 ZNF304Q9HCX3 659 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 MKKSQ9NPJ1 570 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 LRFN1Q9P244 771 aa4.88□□□□□ -1.63
VPS45-207ENST00000477558 IFT80Q9P2H3 777 aaPredicted RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 CPSF2Q9P2I0 782 aaKnown RBP4.88□□□□□ -1.63
VPS45-207ENST00000477558 CDC14AQ9UNH5 594 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms