RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 WISP2O76076 250 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 GLSO94925 669 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-202ENST00000476842 SNX4O95219 450 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 ALOX5P09917 674 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 TROVE2P10155 538 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMIM4-202ENST00000476842 ZNF24P17028 368 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 UQCRC2P22695 453 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 IL12BP29460 328 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 SNTA1Q13424 505 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 TP53BP2Q13625 1128 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 LASP1Q14847 261 aaKnown RBP16.33■□□□□ 0.2
SMIM4-202ENST00000476842 HYAL4Q2M3T9 481 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 KRTCAP3Q53RY4 240 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 CDC73Q6P1J9 531 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-202ENST00000476842 C6orf120Q7Z4R8 191 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 FAM110BQ8TC76 370 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 RILPQ96NA2 401 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 YIPF4Q9BSR8 244 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 ACTRT3Q9BYD9 372 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 PIGUQ9H490 435 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 IL1RL2Q9HB29 575 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 DUSP22Q9NRW4 184 aa16.33■□□□□ 0.2
SMIM4-202ENST00000476842 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-202ENST00000476842 PRRC2CQ9Y520 2896 aaKnown RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 A0A0G2JND7 137 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 GXYLT2A0PJZ3 443 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 ANKUB1A6NFN9 424 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 TRIM3O75382 744 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 KCNH1O95259 989 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 IL33O95760 270 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 KRT16P08779 473 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 SOAT1P35610 550 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 RFC3P40938 356 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 PSMD4P55036 377 aaKnown RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 PPIAP62937 165 aaKnown RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 KCNJ2P63252 427 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 PLGLB1Q02325 96 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 DUSP5Q16690 384 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 METTL21CQ5VZV1 264 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 BICRALQ6AI39 1079 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 SLC30A6Q6NXT4 461 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 MSANTD1Q6ZTZ1 278 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 FUNDC1Q8IVP5 155 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 OR9I1Q8NGQ6 314 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 OR5AK3PQ8NH89 298 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 PIK3R3Q92569 461 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 GPR137Q96N19 417 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 ZNF317Q96PQ6 595 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 STACQ99469 402 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 DOHHQ9BU89 302 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 TTTY12Q9BZ98 90 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 ZFP64Q9NPA5 681 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 FAF1Q9UNN5 650 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-202ENST00000476842 TRIM33Q9UPN9 1127 aa16.32■□□□□ 0.2
SMIM4-202ENST00000476842 NPIPA5E9PKD4 350 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 ASNA1O43681 348 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 ICOSLGO75144 302 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 CYP4B1P13584 511 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 NCF2P19878 526 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-202ENST00000476842 GNLYP22749 145 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 PTGDSP41222 190 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 MAN2A2P49641 1150 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 BLOC1S3Q6QNY0 202 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 SLC22A16Q86VW1 577 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 FBXO30Q8TB52 745 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 ADAMTS15Q8TE58 950 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 RNF138Q8WVD3 245 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 PANX1Q96RD7 426 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 INPP5KQ9BT40 448 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 BTBD2Q9BX70 525 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 METTL7AQ9H8H3 244 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 SERHLQ9NQF3 203 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 SEC14L3Q9UDX4 400 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 BOKQ9UMX3 212 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-202ENST00000476842 NPIPA1Q9UND3 350 aa16.31■□□□□ 0.2
SMIM4-202ENST00000476842 RNF103-CHMP3A0A140T963 221 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 PRAMEF25A6NGN4 478 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 CCDC154A6NI56 674 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 ACOT7O00154 380 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 TFECO14948 347 aaPredicted RBP16.3■□□□□ 0.2
SMIM4-202ENST00000476842 HS6ST1O60243 411 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 KCNK2O95069 426 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 IGKV1D-16P01601 117 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 MATN1P21941 496 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 ARFIP2P53365 341 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 MRPL49Q13405 166 aaKnown RBP16.3■□□□□ 0.2
SMIM4-202ENST00000476842 ELOAQ14241 798 aaKnown RBP16.3■□□□□ 0.2
SMIM4-202ENST00000476842 SQLEQ14534 574 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 SAXO2Q658L1 398 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 GFRALQ6UXV0 394 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 CLEC4FQ8N1N0 589 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 TMEM251Q8N6I4 163 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
SMIM4-202ENST00000476842 COX18Q8N8Q8 333 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms