RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DUSP2Q05923 314 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
BRCA1-213ENST00000476777 RAET1LQ5VY80 246 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 SLC48A1Q6P1K1 146 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 METTL25Q8N6Q8 603 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 FADS6Q8N9I5 356 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 OR4K17Q8NGC6 315 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
BRCA1-213ENST00000476777 BTBD9Q96Q07 612 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 SERPINI1Q99574 410 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 RBBP8Q99708 897 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 ACTR6Q9GZN1 396 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 ADAM29Q9UKF5 820 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 LIPT1Q9Y234 373 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 RNF11Q9Y3C5 154 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 ANGPTL3Q9Y5C1 460 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 PCDHA9Q9Y5H5 950 aa10.19□□□□□ -0.78
BRCA1-213ENST00000476777 MAGED1Q9Y5V3 778 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-213ENST00000476777 OR2M5A3KFT3 312 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 GOLGA6L10A6NI86 522 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 NDUFS7O75251 213 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 ERAL1O75616 437 aaKnown RBP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 ALDOAP04075 364 aaKnown RBP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CT45A8P0DMV1 189 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CT45A9P0DMV2 189 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 FCGR2AP12318 317 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 PCSK2P16519 638 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 HK1P19367 917 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CSNK2A2P19784 350 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 IL11P20809 199 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 SLC6A8P48029 635 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 PIK3CGP48736 1102 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CORO7P57737 925 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 MRPS35P82673 323 aaKnown RBP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 ZNF844Q08AG5 666 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 EFR3AQ14156 821 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 SLMAPQ14BN4 828 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 LTB4RQ15722 352 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CT45A2Q5DJT8 189 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 C6orf52Q5T4I8 152 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 LARP4Q71RC2 724 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 L3MBTL4Q8NA19 623 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 OR5M1Q8NGP8 315 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 OR6K3Q8NGY3 331 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 SMAP2Q8WU79 429 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-213ENST00000476777 NEUROG1Q92886 237 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 FBXW5Q969U6 566 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 OSBPL9Q96SU4 736 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 CPNE1Q99829 537 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 OR10A4Q9H209 315 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 DSN1Q9H410 356 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 NMRAL1Q9HBL8 299 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 EMC9Q9Y3B6 208 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
BRCA1-213ENST00000476777 A0A096LNT2 108 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 C1orf226A1L170 272 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 H3BML4 177 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 LINC01387J3KSC0 135 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 NME6O75414 186 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 SEC31AO94979 1220 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 DEKP35659 375 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 MAPK12P53778 367 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 RPS3AP61247 264 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GTF2H2Q13888 395 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GANABQ14697 944 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CTU2Q2VPK5 515 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 PGGHGQ32M88 737 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CCNYL2Q5T2Q4 361 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 FAM180BQ6P0A1 224 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GTF2H2CQ6P1K8 395 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 NPSR1Q6W5P4 371 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 DNAJC14Q6Y2X3 702 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GOLGA7Q7Z5G4 137 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CMC1Q7Z7K0 106 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 ZBED8Q8IZ13 594 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 OR2M3Q8NG83 312 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GFM2Q969S9 779 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CNRIP1Q96F85 164 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GMPPAQ96IJ6 420 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 VSTM2LQ96N03 204 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 MRPL1Q9BYD6 325 aaKnown RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 STMN4Q9H169 189 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-213ENST00000476777 IPPKQ9H8X2 491 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 ANKRA2Q9H9E1 313 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 ZBTB26Q9HCK0 441 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 SAYSD1Q9NPB0 183 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 TMEM160Q9NX00 188 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 MED11Q9P086 117 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 PPP4R1LQ9P1A2 415 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 WHRNQ9P202 907 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 TXNDC16Q9P2K2 825 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 CLEC4AQ9UMR7 237 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 GPR52Q9Y2T5 361 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 ACOT9Q9Y305 439 aa10.17□□□□□ -0.78
BRCA1-213ENST00000476777 TGP01266 2768 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms