RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KCNJ5P48544 419 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 IQCCQ4KMZ1 466 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 SFT2D3Q587I9 215 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 FIGNL1Q6PIW4 674 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 EPHX4Q8IUS5 362 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 RASSF5Q8WWW0 418 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 METTL21AQ8WXB1 218 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 GEMIN6Q8WXD5 167 aaKnown RBP26.77■■□□□ 1.88
VEGFA-211ENST00000476772 ZG16BQ96DA0 208 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 ART5Q96L15 291 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 SPATA5L1Q9BVQ7 753 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 ZNF350Q9GZX5 532 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 FBXO34Q9NWN3 711 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 BAG5Q9UL15 447 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 PADI2Q9Y2J8 665 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 SH3GLB1Q9Y371 365 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 AK5Q9Y6K8 562 aa26.77■■□□□ 1.88
VEGFA-211ENST00000476772 C9J4A7 227 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 PEX1O43933 1283 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 DIRAS1O95057 198 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 PRSS23O95084 383 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 AK1P00568 194 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 FESP07332 822 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 C3orf38Q5JPI3 329 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 IZUMO2Q6UXV1 221 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 PIWIL3Q7Z3Z3 882 aaKnown RBP26.76■■□□□ 1.87
VEGFA-211ENST00000476772 RMND5BQ96G75 393 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-211ENST00000476772 NUDT9Q9BW91 350 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 NXT1Q9UKK6 140 aaKnown RBP26.76■■□□□ 1.87
VEGFA-211ENST00000476772 OAZ3Q9UMX2 235 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 C9orf172C9J069 976 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 SOX30O94993 753 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 ALPPP05187 535 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 CT45A8P0DMV1 189 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 CT45A9P0DMV2 189 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 NNATQ16517 81 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 CT45A2Q5DJT8 189 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 TSEN54Q7Z6J9 526 aaKnown RBP26.76■■□□□ 1.87
VEGFA-211ENST00000476772 CATSPER1Q8NEC5 780 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 OR4N2Q8NGD1 307 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 SLC46A1Q96NT5 459 aa26.76■■□□□ 1.87
VEGFA-211ENST00000476772 GNGT2O14610 69 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 STX11O75558 287 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 KCNK2O95069 426 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 NCF4Q15080 339 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 FAM69BQ5VUD6 431 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 WDR36Q8NI36 951 aaKnown RBP26.75■■□□□ 1.87
VEGFA-211ENST00000476772 APOBEC4Q8WW27 367 aaKnown RBP26.75■■□□□ 1.87
VEGFA-211ENST00000476772 PROX1Q92786 737 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 TMBIM1Q969X1 311 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF354BQ96LW1 612 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 COQ10BQ9H8M1 238 aa26.75■■□□□ 1.87
VEGFA-211ENST00000476772 PABPC4LP0CB38 370 aaKnown RBP26.74■■□□□ 1.87
VEGFA-211ENST00000476772 TRHRP34981 398 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-211ENST00000476772 PUM1Q14671 1186 aaKnown RBP eCLIP26.74■■□□□ 1.876e-18■■■□□ 15.2
VEGFA-211ENST00000476772 GPR68Q15743 365 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 COMTD1Q86VU5 262 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 VRK2Q86Y07 508 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 MORN4Q8NDC4 146 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 OR1N1Q8NGS0 311 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 MTHFD2LQ9H903 347 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-211ENST00000476772 Q9N2J8 555 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 NDUFAF4Q9P032 175 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 PCDHGA3Q9Y5H0 932 aa26.74■■□□□ 1.87
VEGFA-211ENST00000476772 WDFY3Q8IZQ1 3526 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 TTC36A6NLP5 189 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 DLGAP3O95886 979 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 CYC1P08574 325 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 IST1P53990 364 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF311Q5JNZ3 666 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 TMEM205Q6UW68 189 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF619Q8N2I2 560 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 BTBD9Q96Q07 612 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 SAP130Q9H0E3 1048 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 THSD1Q9NS62 852 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 VNN3Q9NY84 501 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 COPS7AQ9UBW8 275 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 CFL2Q9Y281 166 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 PDLIM1O00151 329 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 BRINP1O60477 761 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF23P17027 643 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 RFX3P48380 749 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 AQP4P55087 323 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 OR2T5Q6IEZ7 315 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 C6orf15Q6UXA7 325 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-211ENST00000476772 TIPARPQ7Z3E1 657 aaKnown RBP26.73■■□□□ 1.87
VEGFA-211ENST00000476772 AMER2Q8N7J2 671 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 ZSCAN1Q8NBB4 408 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 OR2T29Q8NH02 315 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 OR52P1PQ8NH57 321 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 SLC29A1Q99808 456 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 PINK1Q9BXM7 581 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 AMBRA1Q9C0C7 1298 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 FOXJ2Q9P0K8 574 aa26.73■■□□□ 1.87
VEGFA-211ENST00000476772 GPR55Q9Y2T6 319 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-211ENST00000476772 SAGE2PA6NJ88 616 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 ACOX3O15254 700 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 PRKNO60260 465 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 KIAA0513O60268 411 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 EPPINO95925 133 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms