RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FCMRO60667 390 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 C1GALT1C1LP0DN25 315 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CASP3P42574 277 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CEBPGP53567 150 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FOXL2P58012 376 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 RING1Q06587 406 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 GALNT1Q10472 559 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 BIKQ13323 160 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SEC23BQ15437 767 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TEAD4Q15561 434 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PROX2Q3B8N5 592 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PRPF38BQ5VTL8 546 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FAM205BPQ63HN1 556 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PTCRAQ6ISU1 281 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ACSM5Q6NUN0 579 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF544Q6NX49 715 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 UNC5DQ6UXZ4 953 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 VASH1Q7L8A9 365 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PRSS48Q7RTY5 328 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 RBM12BQ8IXT5 1001 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SHISA5Q8N114 240 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 DNAJC22Q8N4W6 341 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SDR9C7Q8NEX9 313 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CCL4L1Q8NHW4 92 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 COQ8AQ8NI60 647 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CHPT1Q8WUD6 406 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 C3orf49Q96BT1 292 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 KCTD12Q96CX2 325 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM80Q96HE8 168 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TREX2Q9BQ50 279 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SLC12A9Q9BXP2 914 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SEMA4CQ9C0C4 833 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 C11orf54Q9H0W9 315 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CLEC4MQ9H2X3 399 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FAM120CQ9NX05 1096 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM9Q9P0T7 183 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SPATA7Q9P0W8 599 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF346Q9UL40 294 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ERVK-11Q9UQG0 969 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FARSAQ9Y285 508 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CMAHPQ9Y471 501 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PCNX1Q96RV3 2341 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF236Q9UL36 1845 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TVP23AA6NH52 213 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 B4DGG1 531 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 INMT-MINDY4F8WBC2 141 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PROM1O43490 865 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 DYRK3O43781 588 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TRIM3O75382 744 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MT-ND4P03905 459 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MAS1P04201 325 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 IL7P13232 177 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MYF5P13349 255 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 IDSP22304 550 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 STAT5AP42229 794 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CCR6P51684 374 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 OR10A3P58181 314 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF33AQ06730 810 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TATDN3Q17R31 274 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MICAQ29983 383 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 LRIT3Q3SXY7 679 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SCGB2B2Q4G0G5 96 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ARMC6Q6NXE6 501 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FAM111BQ6SJ93 734 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 LYPD8Q6UX82 237 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CEACAM19Q7Z692 300 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 RIMKLAQ8IXN7 391 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 CRIPAKQ8N1N5 446 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TEX26Q8N6G2 289 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PDPRQ8NCN5 879 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ADAMTS16Q8TE57 1224 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SPRYD4Q8WW59 207 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 RIT1Q92963 219 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZBED6CLQ96FA7 236 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MCCC1Q96RQ3 725 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 WDR26Q9H7D7 661 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 HCN3Q9P1Z3 774 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SLC23A2Q9UGH3 650 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 SLC6A5Q9Y345 797 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 WDR45Q9Y484 360 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 NOX1Q9Y5S8 564 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 MTCH2Q9Y6C9 303 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 DIDO1Q9BTC0 2240 aaKnown RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ANKRD11Q6UB99 2663 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ANKRD33BA6NCL7 494 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF821O75541 412 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 OR2B3O76000 313 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TP53P04637 393 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ADH5P11766 374 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 TIMP2P16035 220 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 PTPN2P17706 415 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 ITGA3P26006 1051 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 LTBRP36941 435 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 GBX1Q14549 363 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 LYPD4Q6UWN0 246 aa4.7□□□□□ -1.66
CCDC39-204ENST00000476379 RASSF6Q6ZTQ3 369 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms