RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CLDN11O75508 207 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 CXCL14O95715 111 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 FGF19O95750 216 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 S100A8P05109 93 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 SFTPBP07988 381 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 HLA-DPA1P20036 260 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 RPS4Y1P22090 263 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 CNR2P34972 360 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 OMPP47874 163 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 CTBP2P56545 445 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 PURAQ00577 322 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 NAAAQ02083 359 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 MLLT1Q03111 559 aaPredicted RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 CRYZQ08257 329 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 HNRNPA0Q13151 305 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 GTF2H2Q13888 395 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 LRRC32Q14392 662 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 INPP5JQ15735 1006 aaPredicted RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 SGCAQ16586 387 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 C18orf21Q32NC0 220 aaPredicted RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 DCAF4L1Q3SXM0 396 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 NSUN5P2Q63ZY6 315 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 GTF2H2CQ6P1K8 395 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 PID1Q7Z2X4 250 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 CTU1Q7Z7A3 348 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 GPR135Q8IZ08 494 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 NKAIN3Q8N8D7 197 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 TMIEQ8NEW7 156 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 LKAAEAR1Q8TD35 194 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 ALG14Q96F25 216 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 TMEM68Q96MH6 324 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 OR5B2Q96R09 309 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 FAM129BQ96TA1 746 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 ARHGDIGQ99819 225 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 FICDQ9BVA6 458 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 FAIM2Q9BWQ8 316 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 ACTR6Q9GZN1 396 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 SMG9Q9H0W8 520 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 R3HDMLQ9H3Y0 253 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 MVB12BQ9H7P6 319 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 NMNAT1Q9HAN9 279 aaPredicted RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 TXNRD2Q9NNW7 524 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 TREM2Q9NZC2 230 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 NLKQ9UBE8 527 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 WARS2Q9UGM6 360 aaKnown RBP3.84□□□□□ -1.8
USP16-205ENST00000474835 MAB21L2Q9Y586 359 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 HS3ST4Q9Y661 456 aa3.84□□□□□ -1.8
USP16-205ENST00000474835 TMEM218A2RU14 115 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SURF4O15260 269 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LILRB5O75023 590 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ZNF821O75541 412 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 GJB3O75712 270 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 UBL3O95164 117 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 RAB36O95755 333 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 IFNA14P01570 189 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CD74P04233 296 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FGF1P05230 155 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CAPN1P07384 714 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 IFI6P09912 130 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 UCHL1P09936 223 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PRSS56P0CW18 603 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SAGP10523 405 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 ABOP16442 354 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 GJA1P17302 382 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TSPAN8P19075 237 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 STOMP27105 288 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 AOAHP28039 575 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CCR7P32248 378 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SULT1E1P49888 294 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PLK1P53350 603 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 B4GALNT1Q00973 533 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FOXF1Q12946 379 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 PTPRNQ16849 979 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ATP6AP1LQ52LC2 224 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TIGD5Q53EQ6 642 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SFRP5Q5T4F7 317 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 BAIAP2L2Q6UXY1 529 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 ACOT1Q86TX2 421 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 GLB1L2Q8IW92 636 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SLC30A8Q8IWU4 369 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 KLHL36Q8N4N3 616 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SLC37A3Q8NCC5 494 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 FBXO15Q8NCQ5 510 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 SDR9C7Q8NEX9 313 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 OR52N2Q8NGI0 321 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 STK35Q8TDR2 534 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 EEF1AKMT1Q8WVE0 214 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 MARS2Q96GW9 593 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 IER2Q9BTL4 223 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 DUSP26Q9BV47 211 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 SEC11CQ9BY50 192 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 NKX6-2Q9C056 277 aaPredicted RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 CFAP97Q9P2B7 532 aa3.83□□□□□ -1.8
USP16-205ENST00000474835 EIF2B4Q9UI10 523 aaKnown RBP3.83□□□□□ -1.8
USP16-205ENST00000474835 TNFSF18Q9UNG2 199 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms