RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FXYD1O00168 92 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CFLARO15519 480 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DYRK3O43781 588 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ERN1O75460 977 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NKX2-2O95096 273 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 HMGN2P05204 90 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DRD5P21918 477 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ABCD3P28288 659 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 GPC1P35052 558 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 HLCSP50747 726 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NR0B1P51843 470 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PRKAG1P54619 331 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CASP9P55211 416 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 AP2B1P63010 937 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 IRX1P78414 480 aaPredicted RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 FUT5Q11128 374 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 LASP1Q14847 261 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MAPK11Q15759 364 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DUSP5Q16690 384 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MEP1AQ16819 746 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 COX20Q5RI15 118 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 LRIF1Q5T3J3 769 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ANXA8L1Q5VT79 327 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SAXO2Q658L1 398 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SLC6A19Q695T7 634 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DNAJC14Q6Y2X3 702 aaPredicted RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 Q6ZS92 163 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MSANTD1Q6ZTZ1 278 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SLC29A4Q7RTT9 530 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 OLIG3Q7RTU3 272 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 C6orf120Q7Z4R8 191 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CPLX4Q7Z7G2 160 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PRR22Q8IZ63 422 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DPP10Q8N608 796 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NATD1Q8N6N6 113 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NUP43Q8NFH3 380 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 OR10G3Q8NGC4 313 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 OR5L2Q8NGL0 311 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 OR4A15Q8NGL6 344 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ZFP28Q8NHY6 868 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 FBXO30Q8TB52 745 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MIPOL1Q8TD10 442 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SFXN5Q8TD22 340 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 RNF138Q8WVD3 245 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PIK3R3Q92569 461 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 TP53INP1Q96A56 240 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NEURL3Q96EH8 262 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SLC35A4Q96G79 324 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MS4A4EQ96PG1 132 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ZBTB18Q99592 522 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MFRPQ9BY79 579 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 NEUROD4Q9HD90 331 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 EQTNQ9NQ60 294 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DEPPQ9NTK1 212 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ZCCHC3Q9NUD5 404 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 DDX18Q9NVP1 670 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 FLRT3Q9NZU0 649 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 VAPAQ9P0L0 249 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PRODH2Q9UF12 536 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 YARS2Q9Y2Z4 477 aaKnown RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF451Q9Y4E5 1061 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PCDHB14Q9Y5E9 798 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 HRH3Q9Y5N1 445 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 SNX8Q9Y5X2 465 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CHCHD2Q9Y6H1 151 aaPredicted RBP6.43□□□□□ -1.38
LIMD1-204ENST00000474665 MPDZO75970 2070 aa6.43□□□□□ -1.38
LIMD1-204ENST00000474665 CCDC168Q8NDH2 2452 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 A0A096LPI6 279 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 RNF103-CHMP3A0A140T963 221 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 PINLYPA6NC86 204 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 OR5H15A6NDH6 313 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 C17orf51A8MQB3 221 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 RFXANKO14593 260 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TSPAN2O60636 221 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 UGT2B11O75310 529 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 BCAS2O75934 225 aaPredicted RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SORBS2O94875 1100 aaKnown RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 UNC5CO95185 931 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 FAM107AO95990 144 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 C8BP07358 591 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ZCCHC18P0CG32 403 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 CCL3P10147 92 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 UQCRC2P22695 453 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 GABRA3P34903 492 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 PTGDSP41222 190 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TRPC1P48995 793 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 CYB561P49447 251 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SSR4P51571 173 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 FBXW4P57775 412 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 STX1BP61266 288 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 ZNF155Q12901 538 aaPredicted RBP6.42□□□□□ -1.38
LIMD1-204ENST00000474665 TP53BP2Q13625 1128 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 SELPLGQ14242 412 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 OR1C1Q15619 314 aa6.42□□□□□ -1.38
LIMD1-204ENST00000474665 NTRK2Q16620 822 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms