RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 NFKBIDQ8NI38 313 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 SLC22A8Q8TCC7 542 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 ELP5Q8TE02 316 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 FIG4Q92562 907 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 ASB9Q96DX5 294 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 TMEM19Q96HH6 336 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 THOC3Q96J01 351 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 ZNF583Q96ND8 569 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 BTBD2Q9BX70 525 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 NXF5Q9H1B4 397 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 MUC13Q9H3R2 512 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 TMEM38AQ9H6F2 299 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 CACYBPQ9HB71 228 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 A4GALTQ9NPC4 353 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 GIN1Q9NXP7 522 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 CALML5Q9NZT1 146 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 GMPR2Q9P2T1 348 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 SUCOQ9UBS9 1254 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 EGFL7Q9UHF1 273 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 MAGEL2Q9UJ55 1249 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 MRTO4Q9UKD2 239 aaKnown RBP7.72□□□□□ -1.17
CNN3-205ENST00000474409 CBLCQ9ULV8 474 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 USP22Q9UPT9 525 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 LIPT1Q9Y234 373 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 ASPMQ8IZT6 3477 aa7.72□□□□□ -1.17
CNN3-205ENST00000474409 GXYLT2A0PJZ3 443 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 WWP2O00308 870 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 CXCR6O00574 342 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ARPC2O15144 300 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ACOX3O15254 700 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 EFSO43281 561 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 STX11O75558 287 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 PDE9AO76083 593 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SORBS2O94875 1100 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 CT45A8P0DMV1 189 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 CT45A9P0DMV2 189 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 NQO1P15559 274 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 NCK1P16333 377 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 HTR1EP28566 365 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 MSX2P35548 267 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 EIF2S3P41091 472 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 PPICP45877 212 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 MAN2A2P49641 1150 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TMED10P49755 219 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 GZMMP51124 257 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TMPRSS3P57727 454 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 MRPS22P82650 360 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 FLOT2Q14254 428 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SYPL1Q16563 259 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 DECR1Q16698 335 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 DEFB109BQ30KR1 87 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ARHGAP11BQ3KRB8 267 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 LRRC23Q53EV4 343 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 CT45A2Q5DJT8 189 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 EXOSC6Q5RKV6 272 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 CCNJQ5T5M9 372 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 C1orf146Q5VVC0 180 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 FCRLBQ6BAA4 426 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 REEP3Q6NUK4 255 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 JMJD6Q6NYC1 403 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 GALNT10Q86SR1 603 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 PTOV1Q86YD1 416 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SLC34A3Q8N130 599 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 METTL25Q8N6Q8 603 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SIRT6Q8N6T7 355 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 AMER2Q8N7J2 671 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ZNF441Q8N8Z8 693 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ANKFN1Q8N957 763 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 BBS10Q8TAM1 723 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 BRIX1Q8TDN6 353 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 SLC38A5Q8WUX1 472 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 HOXB13Q92826 284 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 FAM162AQ96A26 154 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 ADIPOR1Q96A54 375 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 EFHD2Q96C19 240 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 OMA1Q96E52 524 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 HSPBAP1Q96EW2 488 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SLC35A4Q96G79 324 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 LRGUKQ96M69 825 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 G6PC3Q9BUM1 346 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TRIM15Q9C019 465 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 LHPPQ9H008 270 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TRIM45Q9H8W5 580 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 ABI3Q9P2A4 366 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 MYOTQ9UBF9 498 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 CD300AQ9UGN4 299 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SLC7A8Q9UHI5 535 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 TEKT2Q9UIF3 430 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 GPR55Q9Y2T6 319 aaPredicted RBP7.71□□□□□ -1.18
CNN3-205ENST00000474409 WDR45Q9Y484 360 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 SNX13Q9Y5W8 968 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 KCNE3Q9Y6H6 103 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 CELSR3Q9NYQ7 3312 aa7.71□□□□□ -1.18
CNN3-205ENST00000474409 C1QTNF9BB2RNN3 333 aa7.7□□□□□ -1.18
CNN3-205ENST00000474409 ANKRD65E5RJM6 399 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms