RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 AKIRIN1Q9H9L7 192 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 DCAF13Q9NV06 445 aaKnown RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CBLCQ9ULV8 474 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ERVK-11Q9UQG0 969 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC9A8Q9Y2E8 581 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 FAM32AQ9Y421 112 aaKnown RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 AP4S1Q9Y587 144 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 FAM186AA6NE01 2351 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SDK2Q58EX2 2172 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 IGHV1-45A0A0A0MS14 117 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 TCRBV3S1A0A5B6 114 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CDRT15L2A8MXV6 281 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 M0QX08 132 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HRKO00198 91 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HNRNPRO43390 633 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CNOT3O75175 753 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 REM1O75628 298 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 KRT36O76013 467 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ATP6V1G2O95670 118 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 DDAH2O95865 285 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 OPN1SWP03999 348 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 UMODP07911 640 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 TFPTP0C1Z6 253 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 RAP2AP10114 183 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC7A1P30825 629 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 NR0B1P51843 470 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SESN3P58005 492 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 RPS18P62269 152 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 RIPK1Q13546 671 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 EBPQ15125 230 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ADRM1Q16186 407 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 FXNQ16595 210 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 LIN52Q52LA3 116 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 IFI44LQ53G44 452 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CRB2Q5IJ48 1285 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF311Q5JNZ3 666 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CCDC80Q76M96 950 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 EIF3MQ7L2H7 374 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 MARCH9Q86YJ5 346 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 KBTBD2Q8IY47 623 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF619Q8N2I2 560 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 C10orf111Q8N326 155 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC5A8Q8N695 610 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF615Q8N8J6 731 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ANKFN1Q8N957 763 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CHDHQ8NE62 594 aaPredicted RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 GEMIN6Q8WXD5 167 aaKnown RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 PMM1Q92871 262 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HSPBAP1Q96EW2 488 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC35A4Q96G79 324 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 PYURFQ96I23 114 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 VSTM2LQ96N03 204 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 BTBD9Q96Q07 612 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 NUDT9Q9BW91 350 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 WWTR1Q9GZV5 400 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HOXD1Q9GZZ0 328 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF700Q9H0M5 742 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 VCXQ9H320 206 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SERHL2Q9H4I8 314 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 MAGIXQ9H6Y5 334 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 MTHFD2LQ9H903 347 aaPredicted RBP9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF160Q9HCG1 818 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 S100A14Q9HCY8 104 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 OLAHQ9NV23 265 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 ABI3Q9P2A4 366 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 CLDN16Q9Y5I7 305 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 HS3ST3B1Q9Y662 390 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 SEC16AO15027 2179 aa9.53□□□□□ -0.88
PRPF38A-202ENST00000474048 LOC102723996A0A087X1L8 192 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 A0A1W2PNU3 283 aaPredicted RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 H3BNH8 94 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 SCDO00767 359 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 MGRN1O60291 552 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 TPST1O60507 370 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 DEAF1O75398 565 aaPredicted RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 KLF7O75840 302 aaPredicted RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 PRKD3O94806 890 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNK2O95069 426 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 HPP00738 406 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 C1QCP02747 245 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 IGKV3-11P04433 115 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 IFNW1P05000 195 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FABP3P05413 133 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 DBIP07108 87 aaKnown RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 S1PR1P21453 382 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 DRD5P21918 477 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FASP25445 335 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 PIGAP37287 484 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 MAN2A2P49641 1150 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 ARHGDIAP52565 204 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 RRADP55042 308 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FOXL2P58012 376 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 SELENOWP63302 87 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 RNF4P78317 190 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms