RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 OR14A16Q8NHC5 309 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 DAZLQ92904 295 aaKnown RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 VPS50Q96JG6 964 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 ZNF607Q96SK3 696 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 CIB1Q99828 191 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 LMF2Q9BU23 707 aaKnown RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 LIN28AQ9H9Z2 209 aaKnown RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 LIPT1Q9Y234 373 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 WDR45Q9Y484 360 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 A0A0G2JPF8 293 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 HNRNPCL2B2RXH8 293 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 HNRNPCL3B7ZW38 293 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 KCNK2O95069 426 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 AGR2O95994 175 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 CST1P01037 141 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 FABP3P05413 133 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 FESP07332 822 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 HNRNPCL4P0DMR1 293 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 POU6F2P78424 691 aaPredicted RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 FOXD4Q12950 439 aaPredicted RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 GRAMD1BQ3KR37 738 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 IRAK1BP1Q5VVH5 260 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 PAPD4Q6PIY7 484 aaKnown RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 KRT73Q86Y46 540 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 ZSCAN1Q8NBB4 408 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 OR7G1Q8NGA0 311 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 OR1N1Q8NGS0 311 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 CT55Q8WUE5 264 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 HOXB13Q92826 284 aaPredicted RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 WDR77Q9BQA1 342 aaPredicted RBP11.68□□□□□ -0.54
PCCB-211ENST00000473073 ZPBPQ9BS86 351 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 MAGIXQ9H6Y5 334 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 WDR54Q9H977 334 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 BCL2L10Q9HD36 194 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 PADI1Q9ULC6 663 aa11.68□□□□□ -0.54
PCCB-211ENST00000473073 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 J3KTA2 159 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PDLIM1O00151 329 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PEX12O00623 359 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PDE9AO76083 593 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 EPPINO95925 133 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 IFNA14P01570 189 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 TCN2P20062 427 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 MAGEA2P43356 314 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 TXNL4AP83876 142 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 GNA13Q14344 377 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PUM1Q14671 1186 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCCB-211ENST00000473073 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 IFI44LQ53G44 452 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CPEB2Q7Z5Q1 589 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 TSEN54Q7Z6J9 526 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 LSRQ86X29 649 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 EPHX4Q8IUS5 362 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 LACC1Q8IV20 430 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PRR22Q8IZ63 422 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 METTL25Q8N6Q8 603 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CHDHQ8NE62 594 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 LZICQ8WZA0 190 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 BTBD2Q9BX70 525 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 ZNF350Q9GZX5 532 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 NXF5Q9H1B4 397 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 NTN4Q9HB63 628 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 IL1RAPQ9NPH3 570 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 COPS7AQ9UBW8 275 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 PRODH2Q9UF12 536 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 ZNF223Q9UK11 482 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 OAZ3Q9UMX2 235 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 OR10H1Q9Y4A9 318 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 U3KQV3 271 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 SAGE2PA6NJ88 616 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 M0R3H8 397 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 CLOCKO15516 846 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 BRINP1O60477 761 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 SERPINB7O75635 380 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 LDLRP01130 860 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 ALPPP05187 535 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CDK4P11802 303 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 CEACAM1P13688 526 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 VHLP40337 213 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 KCNJ5P48544 419 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 GABREP78334 506 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 EBPQ15125 230 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 MAPK14Q16539 360 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 ZNF311Q5JNZ3 666 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 OGFRL1Q5TC84 451 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 TMEM205Q6UW68 189 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 C16orf47Q6ZP98 133 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 RBM45Q8IUH3 476 aaKnown RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 APCDD1LQ8NCL9 501 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 NFAM1Q8NET5 270 aaPredicted RBP11.67□□□□□ -0.54
PCCB-211ENST00000473073 OR4D11Q8NGI4 311 aa11.67□□□□□ -0.54
PCCB-211ENST00000473073 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms