RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LIN28AQ9H9Z2 209 aaKnown RBP8.43□□□□□ -1.06
SMC4-213ENST00000472282 ATAD3AQ9NVI7 634 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.43□□□□□ -1.064e-98■■■■■ 943.1
SMC4-213ENST00000472282 LRFN1Q9P244 771 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 BCAP29Q9UHQ4 241 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 TINAGQ9UJW2 476 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 MAPRE3Q9UPY8 281 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 PCDHGB6Q9Y5F9 930 aa8.43□□□□□ -1.06
SMC4-213ENST00000472282 TMEM200CA6NKL6 621 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 PRSS44E7EML9 344 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 NPIPA5E9PKD4 350 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 WWP2O00308 870 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 CCL21O00585 134 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 IL12AP29459 219 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 CDK9P50750 372 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 NR0B1P51843 470 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 CLNS1AP54105 237 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 MANFP55145 182 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 STX1BP61266 288 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 ADORA2A-AS1P86434 159 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 ALDH6A1Q02252 535 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 EBPQ15125 230 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 MAPKAPK3Q16644 382 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 GSTA3Q16772 222 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 DPY19L1Q2PZI1 675 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 FAM174BQ3ZCQ3 159 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 SPANXN4Q5MJ08 99 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 SP5Q6BEB4 398 aaPredicted RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 SLC25A25Q6KCM7 469 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 TMEM107Q6UX40 140 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 SLC29A4Q7RTT9 530 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 CAMKMTQ7Z624 323 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 FGD2Q7Z6J4 655 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 SIAH3Q8IW03 269 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 LGI4Q8N135 537 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 CPSF7Q8N684 471 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 ZNF615Q8N8J6 731 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 OR7G2Q8NG99 324 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 OR52R1Q8NGF1 315 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 OR9I1Q8NGQ6 314 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 OR8K3Q8NH51 312 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 STON2Q8WXE9 905 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 TESCQ96BS2 214 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 COQ8BQ96D53 544 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 MAGED4Q96JG8 741 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 GPR137Q96N19 417 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 RILPQ96NA2 401 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 PRPF18Q99633 342 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 DUSP26Q9BV47 211 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 TMEM120AQ9BXJ8 343 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 BHLHE41Q9C0J9 482 aaPredicted RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 WWTR1Q9GZV5 400 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 OR10A5Q9H207 317 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 ACSS1Q9NUB1 689 aaPredicted RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 ZNF639Q9UID6 485 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 NPIPA1Q9UND3 350 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 DTX4Q9Y2E6 619 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 PHF3Q92576 2039 aaKnown RBP8.42□□□□□ -1.06
SMC4-213ENST00000472282 ZNF407Q9C0G0 2248 aa8.42□□□□□ -1.06
SMC4-213ENST00000472282 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 A0A1W2PRB8 838 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 OR6C76A6NM76 312 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 FCHO1O14526 889 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 NME2P1O60361 137 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 PLOD3O60568 738 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 SLC19A2O60779 497 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 NME6O75414 186 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 ITGA10O75578 1167 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 SLC25A12O75746 678 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 SLITRK5O94991 958 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 C6orf47O95873 294 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ABCB1P08183 1280 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 GPX3P22352 226 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 NME2P22392 152 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 LSP1P33241 339 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 RFC3P40938 356 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 KIR3DL1P43629 444 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 DGKQP52824 942 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ARFIP2P53365 341 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 SEC24CP53992 1094 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 WNT3P56703 355 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 GNGT1P63211 74 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 PHC1P78364 1004 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ZNF155Q12901 538 aaPredicted RBP8.41□□□□□ -1.06
SMC4-213ENST00000472282 PAOXQ6QHF9 649 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 SZRD1Q7Z422 152 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 MDGA2Q7Z553 956 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 MRGPRGQ86SM5 289 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ANKRD46Q86W74 232 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 CLECL1Q8IZS7 167 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 ARMC10Q8N2F6 343 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 MIER2Q8N344 545 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 NATD1Q8N6N6 113 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 TMEM178AQ8NBL3 297 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 OR7G1Q8NGA0 311 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 OR8J2Q8NGG1 315 aa8.41□□□□□ -1.06
SMC4-213ENST00000472282 OR5L2Q8NGL0 311 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms