RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HADHBP55084 474 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 STARD6P59095 220 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 HAND2P61296 217 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 BASP1P80723 227 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 YWHAHQ04917 246 aaPredicted RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 ACTN3Q08043 901 aaPredicted RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 SNX1Q13596 522 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 DPYSQ14117 519 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 MORF4L2Q15014 288 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 TRADDQ15628 312 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 FBXO48Q5FWF7 155 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 HHATQ5VTY9 493 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 SHQ1Q6PI26 577 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 APOOLQ6UXV4 268 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 SCARA5Q6ZMJ2 495 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 Q6ZRG5 221 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 LAX1Q8IWV1 398 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 C10orf53Q8N6V4 93 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 SETD6Q8TBK2 473 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 TFB1MQ8WVM0 346 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 RAPGEF5Q92565 580 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 PRCCQ92733 491 aaPredicted RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 KRT35Q92764 455 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 RAB3CQ96E17 227 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 SSX3Q99909 188 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 RIOK1Q9BRS2 568 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 OSBPL10Q9BXB5 764 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 GCOM2Q9BZD3 368 aaPredicted RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 TRPV6Q9H1D0 765 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 VPS18Q9P253 973 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 MTRF1LQ9UGC7 380 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 APOBEC3BQ9UH17 382 aaKnown RBP2.9□□□□□ -1.95
CD46-213ENST00000471987 FAM153AQ9UHL3 310 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 EXOC7Q9UPT5 735 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 PRELID1Q9Y255 219 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 ACEP12821 1306 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 MYO3BQ8WXR4 1341 aa2.9□□□□□ -1.95
CD46-213ENST00000471987 DHX29Q7Z478 1369 aaKnown RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 LOC100653049A0A140TA62 436 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 MAGEB16A2A368 324 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CTAGE15A4D2H0 777 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 TCP11X1B4DZS4 312 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 GPR89AB7ZAQ6 455 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 YKT6O15498 198 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 PSMD3O43242 534 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 PEX11AO75192 247 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 KRT34O76011 436 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 RPSAP08865 295 aaKnown RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 POLR2MP0CAP2 368 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 GPR89BP0CG08 455 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 EPB41P11171 864 aaKnown RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 GDI1P31150 447 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CA8P35219 290 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 XCR1P46094 333 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CCNHP51946 323 aaPredicted RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 SLC7A2P52569 658 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 AP3M2P53677 418 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 ARF5P84085 180 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 GABPAQ06546 454 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 SPAG1Q07617 926 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 P2RY14Q15391 338 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CCDC14Q49A88 953 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 AARDQ4LEZ3 155 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 SLC39A12Q504Y0 691 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 HSP90AA5PQ58FG0 334 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CENPPQ6IPU0 288 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 DCLRE1AQ6PJP8 1040 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 PIWIL3Q7Z3Z3 882 aaKnown RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 CTAGE6Q86UF2 777 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 HOOK3Q86VS8 718 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 WDR49Q8IV35 697 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CCDC26Q8TAB7 109 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 AGR3Q8TD06 166 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 UBLCP1Q8WVY7 318 aaPredicted RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 SLC5A11Q8WWX8 675 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 ERO1AQ96HE7 468 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 ATP6V1G3Q96LB4 118 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 SH3GL3Q99963 347 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 C19orf43Q9BQ61 176 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 SPZ1Q9BXG8 430 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 NMUR2Q9GZQ4 415 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 GLT8D2Q9H1C3 349 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 CXXC4Q9H2H0 198 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 THAP9Q9H5L6 903 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 COPS7BQ9H9Q2 264 aaPredicted RBP2.89□□□□□ -1.95
CD46-213ENST00000471987 TMEM165Q9HC07 324 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 DPM3Q9P2X0 92 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 FETUBQ9UGM5 382 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 WDR19Q8NEZ3 1342 aa2.89□□□□□ -1.95
CD46-213ENST00000471987 KDRP35968 1356 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 TNIKQ9UKE5 1360 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 IGLV8-61A0A075B6I0 122 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 NDUFS8O00217 210 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 CHUKO15111 745 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 MAGEB4O15481 346 aaPredicted RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 TTI1O43156 1089 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 EMC8O43402 210 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms