RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 DLX3O60479 287 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CBX7O95931 251 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UGT2B10P36537 528 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CPOXP36551 454 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LMAN1LQ9HAT1 526 aa12.6□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 H7C2Y5 167 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MAN2B1O00754 1011 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IMPA2O14732 288 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 AQP2P41181 271 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CST6Q15828 149 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TMEM236Q5W0B7 351 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GID4Q8IVV7 300 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MARVELD2Q8N4S9 558 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLC2A12Q8TD20 617 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM46BQ96A09 425 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TWNKQ96RR1 684 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RNF38Q9H0F5 515 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PISDQ9UG56 409 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LSM5Q9Y4Y9 91 aaKnown RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FAM230AA0A1W2PPH8 454 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GJE1A6NN92 205 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KCNK5O95279 499 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GPR143P51810 404 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KLHDC10Q6PID8 442 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR4K15Q8NH41 348 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FNIP2Q9P278 1114 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTGDR2Q9Y5Y4 395 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DCAF4L2Q8NA75 395 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SPTSSAQ969W0 71 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SYNPO2LQ9H987 977 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PLEKHJ1Q9NW61 149 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GABRR1P24046 479 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PTAFRP25105 342 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FOLR3P41439 243 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 IDH3GP51553 393 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 JAM2P57087 298 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UBE2G2P60604 165 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF767PQ75MW2 155 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ITGB8P26012 769 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CLDN2P57739 230 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FGL2Q14314 439 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 LRRC18Q8N456 261 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NLE1Q9NVX2 485 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SLCO3A1Q9UIG8 710 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 DIP2CQ9Y2E4 1556 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 EBLN1P0CF75 366 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 NTSR1P30989 418 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 MZT1Q08AG7 82 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 APOFQ13790 326 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 TMEM246Q9BRR3 403 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 SOX17Q9H6I2 414 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 A0A1W2PP18 115 aa12.58□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CDK2P24941 298 aa12.58□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 GTF2H4Q92759 462 aa12.58□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 FZD8Q9H461 694 aa12.58□□□□□ -0.39
NPHP3-ACAD11-201ENST00000471702 CDC14CA4D256 554 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF33BQ06732 778 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DSC1Q08554 894 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CNIH3Q8TBE1 160 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ASB9Q96DX5 294 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PPA2Q9H2U2 334 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF160Q9HCG1 818 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 WRAP73Q9P2S5 460 aaPredicted RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 hCG_1809904A0A1W2PP81 198 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 A0A1W2PR64 198 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRV1 198 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LRRTM2O43300 516 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms