RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 TEX35Q5T0J7 233 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 UBAP2Q5T6F2 1119 aaKnown RBP12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 PRSS57Q6UWY2 283 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 TIFABQ6ZNK6 161 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 YTHDF3Q7Z739 585 aaKnown RBP12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 LCA5Q86VQ0 697 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 MEIOBQ8N635 442 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 SIMC1Q8NDZ2 872 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 DCAKDQ8WVC6 231 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 SELENOMQ8WWX9 145 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 TM4SF18Q96CE8 201 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 CTHRC1Q96CG8 243 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 PGM2Q96G03 612 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 ADOQ96SZ5 270 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 KLHL28Q9NXS3 571 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 FBXL2Q9UKC9 423 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 PCTPQ9UKL6 214 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 MRPS18CQ9Y3D5 142 aaKnown RBP12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
SEMA3F-208ENST00000470737 UQCRHLA0A096LP55 91 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 EXOC1LA0A1B0GW35 172 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 HCRTR2O43614 444 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 TGM6O95932 706 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 OTCP00480 354 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 SNRPAP09012 282 aaKnown RBP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 PCSK2P16519 638 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 CRYGSP22914 178 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 GRK2P25098 689 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 PCSK6P29122 969 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 PCYT1AP49585 367 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 EMDP50402 254 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 TRA2BP62995 288 aaKnown RBP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 MRPS35P82673 323 aaKnown RBP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 TRAF3Q13114 568 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 RASA2Q15283 850 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 LTB4RQ15722 352 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 BCL2A1Q16548 175 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 OR5M10Q6IEU7 315 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 WDR93Q6P2C0 686 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 VWA1Q6PCB0 445 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 C20orf204Q6ZNR8 217 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 LARP4Q71RC2 724 aaKnown RBP eCLIP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 UBQLNLQ8IYU4 475 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 SAMD14Q8IZD0 417 aaPredicted RBP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 OR4F6Q8NGB9 312 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 PERPQ96FX8 193 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 SLC35A4Q96G79 324 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 GPR78Q96P69 363 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 UTS2RQ9UKP6 389 aa12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 GPR55Q9Y2T6 319 aaPredicted RBP12.55□□□□□ -0.4
SEMA3F-208ENST00000470737 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 PDYNP01213 254 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 GCAP28676 217 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 DSCR4P56555 118 aaPredicted RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 SIRPAP78324 504 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 DUSP2Q05923 314 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 GALNT1Q10472 559 aaPredicted RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 FGFBP1Q14512 234 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 SLC29A2Q14542 456 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 RAET1LQ5VY80 246 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 FAM180BQ6P0A1 224 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 CCDC116Q8IYX3 515 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 C1orf52Q8N6N3 182 aaKnown RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 ZNF675Q8TD23 568 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 ERP27Q96DN0 273 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 STARD4Q96DR4 205 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 CNRIP1Q96F85 164 aaPredicted RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 NSUN5Q96P11 429 aaKnown RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 BTBD9Q96Q07 612 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 OPN3Q9H1Y3 402 aaPredicted RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 ZBTB26Q9HCK0 441 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 FARSBQ9NSD9 589 aaKnown RBP12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 SENP1Q9P0U3 644 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 PPP4R1LQ9P1A2 415 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 OR10H1Q9Y4A9 318 aa12.54□□□□□ -0.4
SEMA3F-208ENST00000470737 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 TSPAN2O60636 221 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 TUBBP07437 444 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 UGT2B10P36537 528 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 PNLIPRP2P54317 469 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 BTLAQ7Z6A9 289 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 PLD6Q8N2A8 252 aaKnown RBP12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 CIARTQ8N365 385 aaPredicted RBP12.53□□□□□ -0.4
SEMA3F-208ENST00000470737 ACMSDQ8TDX5 336 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms