RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 DGAT2Q96PD7 388 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 TAAR9Q96RI9 348 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 SLC26A1Q9H2B4 701 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 PIF1Q9H611 641 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 DENND2DQ9H6A0 471 aaPredicted RBP6.19□□□□□ -1.42
VAMP3-202ENST00000470357 TMEM38AQ9H6F2 299 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 CXorf36Q9H7Y0 433 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 DCLRE1BQ9H816 532 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 GORASP2Q9H8Y8 452 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 WDR54Q9H977 334 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 SLAMF7Q9NQ25 335 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 SLC6A13Q9NSD5 602 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 ZCCHC3Q9NUD5 404 aaKnown RBP6.19□□□□□ -1.42
VAMP3-202ENST00000470357 DDX18Q9NVP1 670 aaKnown RBP6.19□□□□□ -1.42
VAMP3-202ENST00000470357 OCIAD1Q9NX40 245 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 GIN1Q9NXP7 522 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 CALML5Q9NZT1 146 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 NTMQ9P121 344 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 C5AR2Q9P296 337 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 DHCR7Q9UBM7 475 aaKnown RBP6.19□□□□□ -1.42
VAMP3-202ENST00000470357 FAF1Q9UNN5 650 aaPredicted RBP6.19□□□□□ -1.42
VAMP3-202ENST00000470357 CFL2Q9Y281 166 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 LOXL2Q9Y4K0 774 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 PCDHGA8Q9Y5G5 932 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 PCDHGA3Q9Y5H0 932 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 BOD1L1Q8NFC6 3051 aa6.19□□□□□ -1.42
VAMP3-202ENST00000470357 WASHC1A8K0Z3 465 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 B8ZZF3 427 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 C5orf58C9J3I9 102 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 FAM227AF5H4B4 570 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ACOT8O14734 319 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PLD2O14939 933 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ARPC2O15144 300 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 MGRN1O60291 552 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PRAMEF2O60811 474 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 LDB3O75112 727 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PRKRAO75569 313 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PDE9AO76083 593 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 AK1P00568 194 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 GPIP06744 558 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 C8orf89P0DMQ9 161 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 GGT1P19440 569 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 EFNA1P20827 205 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PCGF2P35227 344 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 OR1D4P47884 311 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 CDK9P50750 372 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 POLE2P56282 527 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 DSTNP60981 165 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 AP2B1P63010 937 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PSPHP78330 225 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 MAT1AQ00266 395 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 TARDBPQ13148 414 aaKnown RBP eCLIP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 KPNB1Q14974 876 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ZNHIT3Q15649 155 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ELAVL1Q15717 326 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PRSS53Q2L4Q9 553 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 VMACQ2NL98 169 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 GTDC1Q4AE62 458 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 MINDY4Q4G0A6 757 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ZNF628Q5EBL2 1059 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ATAD3BQ5T9A4 648 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 MFSD4BQ5TF39 518 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 HES3Q5TGS1 186 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 IRAK1BP1Q5VVH5 260 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PRAMEF8Q5VWM4 474 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PRAMEF7Q5VXH5 474 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 TMEM107Q6UX40 140 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 OVCH1Q7RTY7 1134 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 SZRD1Q7Z422 152 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 C6orf120Q7Z4R8 191 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PATL1Q86TB9 770 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 RNF130Q86XS8 419 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 OR2L13Q8N349 312 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 METTL27Q8N6F8 245 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 RNF148Q8N7C7 305 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PLPP5Q8NEB5 264 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 BHLHE22Q8NFJ8 381 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 OR7G1Q8NGA0 311 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 OR9A2Q8NGT5 310 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 STT3BQ8TCJ2 826 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 SLC26A7Q8TE54 656 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 METTL21AQ8WXB1 218 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 DAZLQ92904 295 aaKnown RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 FGF11Q92914 225 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 RIT1Q92963 219 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ANKRD9Q96BM1 317 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 NXPE2Q96DL1 559 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 AURKBQ96GD4 344 aaPredicted RBP6.18□□□□□ -1.42
VAMP3-202ENST00000470357 VPS50Q96JG6 964 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 NSMCE2Q96MF7 247 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 PTCHD1Q96NR3 888 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 SPATA5L1Q9BVQ7 753 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ACTRT3Q9BYD9 372 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ALOXE3Q9BYJ1 711 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 ULBP3Q9BZM4 244 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 EPS8L2Q9H6S3 715 aa6.18□□□□□ -1.42
VAMP3-202ENST00000470357 YY1AP1Q9H869 796 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms