RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TBRG1Q3YBR2 411 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PDZK1Q5T2W1 519 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TMEM107Q6UX40 140 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PIGXQ8TBF5 258 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ACOT11Q8WXI4 607 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 OSTF1Q92882 214 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 RFKQ969G6 155 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PRR14Q9BWN1 585 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 MRPS30Q9NP92 439 aaKnown RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 NTMQ9P121 344 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 A0A0B4J293 547 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 A0A1W2PS29 197 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ANTXRLA6NF34 631 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CCDC182A6NF36 153 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TTC36A6NLP5 189 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CENPXA8MT69 81 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PROM1O43490 865 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 SCO2O43819 266 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ALPPL2P10696 532 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ACP5P13686 325 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 HLA-DMAP28067 261 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 KIR2DL3P43628 341 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 VEGFBP49765 207 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CDH11P55287 796 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TGM3Q08188 693 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 FZD5Q13467 585 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CDK10Q15131 360 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 C18orf63Q68DL7 685 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 GATAD2AQ86YP4 633 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 PEX5LQ8IYB4 626 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 SRFBP1Q8NEF9 429 aaKnown RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 NUP43Q8NFH3 380 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 TOR1AIP2Q8NFQ8 470 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CHFRQ96EP1 664 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 RNF121Q9H920 327 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 SYNPO2LQ9H987 977 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 ASB6Q9NWX5 421 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 CNIH4Q9P003 139 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 POLHQ9Y253 713 aa12.79□□□□□ -0.36
BRCA1-209ENST00000470026 J3QRE1 110 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 THY1P04216 161 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 CHRM5P08912 532 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-209ENST00000470026 FAM157BP0CG42 384 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
BRCA1-209ENST00000470026 MPIP34949 423 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 SOX18P35713 384 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 ERVK-21P61565 698 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 MAP4K2Q12851 820 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 DSG2Q14126 1118 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 FGL2Q14314 439 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 IRF4Q15306 451 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 VASNQ6EMK4 673 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF425Q6IV72 752 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 ZNF620Q6ZNG0 422 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 SIMC1Q8NDZ2 872 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 OR2L3Q8NG85 312 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 OR52E1Q8NGJ3 308 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 LILRB4Q8NHJ6 448 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 MACROD1Q9BQ69 325 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 BTBD1Q9H0C5 482 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 CXXC1Q9P0U4 656 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-209ENST00000470026 OR1A2Q9Y585 309 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
BRCA1-209ENST00000470026 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.36
BRCA1-209ENST00000470026 CENPBD1B2RD01 187 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 FRS3O43559 492 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 KCNJ13O60928 360 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 OR5F1O95221 314 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 NTN1O95631 604 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 GNSP15586 552 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 MYL9P24844 172 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 CERS1P27544 350 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 HTR1FP30939 366 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 MC3RP41968 323 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 PGGHGQ32M88 737 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 UAP1L1Q3KQV9 507 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 PYDC2Q56P42 97 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 EOGTQ5NDL2 527 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 SHFQ7M4L6 423 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 NKAIN4Q8IVV8 208 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 FBXL6Q8N531 539 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 ATP6V1C2Q8NEY4 427 aa12.77□□□□□ -0.36
BRCA1-209ENST00000470026 DNAJA4Q8WW22 397 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms