RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 OR6K3Q8NGY3 331 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 CDKL2Q92772 493 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 KLHL29Q96CT2 875 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 SLC35A4Q96G79 324 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 UBXN10Q96LJ8 280 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 MCMBPQ9BTE3 642 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 ALG2Q9H553 416 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 NMRAL1Q9HBL8 299 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 PFDN4Q9NQP4 134 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 PLSCR4Q9NRQ2 329 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 AHSPQ9NZD4 102 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 GPR55Q9Y2T6 319 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 RNF11Q9Y3C5 154 aa17.01■□□□□ 0.31
NCKIPSD-209ENST00000470006 FOXE1O00358 373 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 KERAO60938 352 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 GUCY1B2O75343 617 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 AQP8O94778 261 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 ATP1B1P05026 303 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 PCSK2P16519 638 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 IVDP26440 423 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 EMDP50402 254 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 MAPK12P53778 367 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 MRPS35P82673 323 aaKnown RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 STX5Q13190 355 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 CTU2Q2VPK5 515 aaKnown RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 FAM180BQ6P0A1 224 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 BEND4Q6ZU67 534 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 TBC1D1Q86TI0 1168 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 ISCA2Q86U28 154 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 NEUROG1Q92886 237 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 EFHD2Q96C19 240 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 GPR22Q99680 433 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 BARX1Q9HBU1 254 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-209ENST00000470006 MED11Q9P086 117 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZNF639Q9UID6 485 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 PSME2Q9UL46 239 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 PCDHA9Q9Y5H5 950 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZNF780BQ9Y6R6 833 aa17■□□□□ 0.31
NCKIPSD-209ENST00000470006 C1orf226A1L170 272 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 OR2M5A3KFT3 312 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 LINC01387J3KSC0 135 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SSX4O60224 188 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 NDUFS7O75251 213 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SEMA3DO95025 777 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 GFAPP14136 432 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 CDC25BP30305 580 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ALDH9A1P49189 494 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 CORO7P57737 925 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SRSF2Q01130 221 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 GUSBP1Q15486 140 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 LTB4RQ15722 352 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 PFKFB4Q16877 469 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 TTC19Q6DKK2 380 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ADAM5Q6NVV9 412 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SLC48A1Q6P1K1 146 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZBED8Q8IZ13 594 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 LILRB1Q8NHL6 650 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 WDR20Q8TBZ3 569 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ATP6V1E2Q96A05 226 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ATOH8Q96SQ7 321 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 RBBP8Q99708 897 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 MRPL1Q9BYD6 325 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SHARPINQ9H0F6 387 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 ESRP2Q9H6T0 727 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 PTGES2Q9H7Z7 377 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 IPPKQ9H8X2 491 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 FOLH1BQ9HBA9 442 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 GDF2Q9UK05 429 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 GPR52Q9Y2T5 361 aa16.99■□□□□ 0.31
NCKIPSD-209ENST00000470006 SYCE1LA8MT33 242 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 CXorf49A8MYA2 514 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 B4DXG7 233 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 TSPAN2O60636 221 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 UGDHO60701 494 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 NME6O75414 186 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 FESP07332 822 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 DANCRP0C864 163 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 EIF1AXP47813 144 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 GAS1P54826 345 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 MRPS22P82650 360 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 OR2M3Q8NG83 312 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 GMPPAQ96IJ6 420 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 CPNE1Q99829 537 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 ANKRA2Q9H9E1 313 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 LRTM1Q9HBL6 345 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 NGBQ9NPG2 151 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 SDHAF3Q9NRP4 125 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 CES1P1Q9UKY3 287 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 OR10H1Q9Y4A9 318 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 ALPK2Q86TB3 2170 aa16.98■□□□□ 0.31
NCKIPSD-209ENST00000470006 PCNX3Q9H6A9 2034 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 EIF1AYO14602 144 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 BCAS2O75934 225 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 CLDN9O95484 217 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 LTA4HP09960 611 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 EVI2BP34910 448 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms