RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 DPRXA6NFQ7 191 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 SLC22A20A6NK97 555 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 SDR42E2A6NKP2 422 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 BTNL10A8MVZ5 291 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 GOLGA8MH3BSY2 632 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 UBFD1O14562 309 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TP53I11O14683 189 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TAPBPO15533 448 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EMC8O43402 210 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 UGT2B11O75310 529 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EEDO75530 441 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 WDR47O94967 919 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 AIFM1O95831 613 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 AHSGP02765 367 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PTMAP06454 111 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 HIST1H2AGP0C0S8 130 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CTAGE8P0CG41 777 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 RAC2P15153 192 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EPORP19235 508 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 HIST1H2ADP20671 130 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 BUD31P41223 144 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 SLC6A8P48029 635 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PCYT1AP49585 367 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 VPS41P49754 854 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 NAP1L1P55209 391 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CLDN20P56880 219 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 C21orf58P58505 322 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 DEFA6Q01524 100 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 LOXL1Q08397 574 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TBX2Q13207 712 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 THOC5Q13769 683 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EFTUD2Q15029 972 aaKnown RBP eCLIP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PPP1R3AQ16821 1122 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 NCMAPQ5T1S8 102 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 MROH9Q5TGP6 573 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CYB5R2Q6BCY4 276 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ADAM5Q6NVV9 412 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CAVIN1Q6NZI2 390 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CASC4Q6P4E1 433 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TRIM40Q6P9F5 258 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ENPP6Q6UWR7 440 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 SLC29A4Q7RTT9 530 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 CTAGE4Q8IX94 777 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 MYO1HQ8N1T3 1032 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TBC1D19Q8N5T2 526 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF615Q8N8J6 731 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 FBXW5Q969U6 566 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 MSI2Q96DH6 328 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 RBM18Q96H35 190 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 HIST1H2AHQ96KK5 128 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 KRT12Q99456 494 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 HIST1H2AJQ99878 128 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 RHNO1Q9BSD3 238 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 H2AFJQ9BTM1 129 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ANP32EQ9BTT0 268 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PINK1Q9BXM7 581 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 MS4A8Q9BY19 250 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 ACTR6Q9GZN1 396 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EHD1Q9H4M9 534 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 METTL7AQ9H8H3 244 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 IPPKQ9H8X2 491 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 LYRM4Q9HD34 91 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 C20orf96Q9NUD7 363 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 TAS2R10Q9NYW0 307 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PAK5Q9P286 719 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 PROCRQ9UNN8 238 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 EXO1Q9UQ84 846 aaKnown RBP4.71□□□□□ -1.66
PTPN4-209ENST00000469511 DLGAP4Q9Y2H0 992 aa4.71□□□□□ -1.66
PTPN4-209ENST00000469511 A0A1W2PP18 115 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 A0A1W2PR48 441 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 NPEPPSL1A6NEC2 478 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 ANKDD1BA6NHY2 528 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 C22orf46C9J442 243 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 PGRMC2O15173 223 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 PFDN6O15212 129 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 SEC14L5O43304 696 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 PSPNO60542 156 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 BANF1O75531 89 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 OPN1LWP04000 364 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 CRHP06850 196 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 PRKCAP17252 672 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 S1PR1P21453 382 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 HIST1H1TP22492 207 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-209ENST00000469511 CHMP24386 653 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 FPR2P25090 351 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 ABCD3P28288 659 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 CETN2P41208 172 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 RGS4P49798 205 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 MECP2P51608 486 aaKnown RBP4.7□□□□□ -1.66
PTPN4-209ENST00000469511 TBL3Q12788 808 aaKnown RBP4.7□□□□□ -1.66
PTPN4-209ENST00000469511 SLAMF1Q13291 335 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 SP140Q13342 867 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 DOC2AQ14183 400 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 EXOSC7Q15024 291 aaKnown RBP4.7□□□□□ -1.66
PTPN4-209ENST00000469511 PON3Q15166 354 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 ETFDHQ16134 617 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF672Q499Z4 452 aaPredicted RBP4.7□□□□□ -1.66
PTPN4-209ENST00000469511 FAM219BQ5XKK7 198 aa4.7□□□□□ -1.66
PTPN4-209ENST00000469511 FAM111BQ6SJ93 734 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms