RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 PIGAP37287 484 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 TRPC1P48995 793 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 PNLIPRP2P54317 469 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 GPR85P60893 370 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 RPP38P78345 283 aaKnown RBP10.98□□□□□ -0.65
VPS13D-204ENST00000469054 EFR3AQ14156 821 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DUSP5Q16690 384 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DECR1Q16698 335 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SAXO2Q658L1 398 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SPATA21Q7Z572 469 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 CPLX4Q7Z7G2 160 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 BCORP1Q8N888 145 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DNAJB8Q8NHS0 232 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 ADAMTS15Q8TE58 950 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 GRHL3Q8TE85 626 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 PIK3R3Q92569 461 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 JADE3Q92613 823 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DIO2Q92813 273 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 HGDQ93099 445 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 EFHD2Q96C19 240 aaPredicted RBP10.98□□□□□ -0.65
VPS13D-204ENST00000469054 TMCO6Q96DC7 493 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 COL21A1Q96P44 957 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 ADOQ96SZ5 270 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SLC35A5Q9BS91 424 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 FAM107BQ9H098 131 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 PIGUQ9H490 435 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 PROK2Q9HC23 129 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SAR1AQ9NR31 198 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DUSP22Q9NRW4 184 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DEPPQ9NTK1 212 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 ASF1BQ9NVP2 202 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 CNOT11Q9UKZ1 510 aaKnown RBP10.98□□□□□ -0.65
VPS13D-204ENST00000469054 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 IGSF10Q6WRI0 2623 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 CPAMD8Q8IZJ3 1885 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 A0A1W2PP18 115 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 DUXAA6NLW8 204 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 G3V3Y1 287 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 SNX3O60493 162 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 CRYABP02511 175 aaKnown RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 GSNP06396 782 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 CAPN3P20807 821 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 CHI3L1P36222 383 aaPredicted RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 CASP3P42574 277 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 MAN2A2P49641 1150 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 MEOX1P50221 254 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 PSMD4P55036 377 aaKnown RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 RPS26P62854 115 aaKnown RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 MRPS22P82650 360 aaKnown RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 PMP22Q01453 160 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 TLE1Q04724 770 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 C6orf10Q5SRN2 563 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 PRAMEF20Q5VT98 475 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 TMEM81Q6P7N7 255 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 SLC2A7Q6PXP3 512 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 FAM180AQ6UWF9 173 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 DNAJC14Q6Y2X3 702 aaPredicted RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 GK5Q6ZS86 529 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 ZNF605Q86T29 641 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 COX18Q8N8Q8 333 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 ZFP62Q8NB50 900 aaPredicted RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 OR2M7Q8NG81 312 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 FAM110BQ8TC76 370 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 MIPOL1Q8TD10 442 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 TSPEARQ8WU66 669 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 FAR1Q8WVX9 515 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 NEURL3Q96EH8 262 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 OTUB1Q96FW1 271 aaPredicted RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 RMND5BQ96G75 393 aaPredicted RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 SLC35G5Q96KT7 338 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 OR7D2Q96RA2 312 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 NODALQ96S42 347 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 BARD1Q99728 777 aaKnown RBP10.97□□□□□ -0.65
VPS13D-204ENST00000469054 FAM173AQ9BQD7 235 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 DOHHQ9BU89 302 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 BTBD2Q9BX70 525 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 AGPAT4Q9NRZ5 378 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 NTNG1Q9Y2I2 539 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 PCDHGB3Q9Y5G1 929 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 NBEAQ8NFP9 2946 aa10.97□□□□□ -0.65
VPS13D-204ENST00000469054 A0A0G2JMM0 328 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 A0A1W2PPB8 328 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 A0A1W2PRS3 328 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 PINLYPA6NC86 204 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 KIR3DP1A8MWS1 328 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 HS6ST1O60243 411 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 KCNK2O95069 426 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 SNX4O95219 450 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 ANP32DO95626 131 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 KRT75O95678 551 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 IGKV1D-16P01601 117 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms