RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GLRBP48167 497 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PCP4P48539 62 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RGS4P49798 205 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 EFNA5P52803 228 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HCCSP53701 268 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GEMP55040 296 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CTBP2P56545 445 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ACTR1AP61163 376 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SEC61A1P61619 476 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PKIAP61925 76 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ERVK-25P63136 954 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MRPS10P82664 201 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MAT1AQ00266 395 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SLC6A3Q01959 620 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SP2Q02086 613 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FPGSQ05932 587 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CACNB2Q08289 660 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GAGE1Q13065 139 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HNRNPA0Q13151 305 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TPBGQ13641 420 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CSHL1Q14406 222 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GPR176Q14439 515 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SSPNQ14714 243 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 STXBP2Q15833 593 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GAB4Q2WGN9 574 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF699Q32M78 642 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SYTL3Q4VX76 610 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SGO1Q5FBB7 561 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZRANB3Q5FWF4 1079 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RNASE10Q5GAN6 216 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF667Q5HYK9 610 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 OR2B11Q5JQS5 317 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ELFN2Q5R3F8 820 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 THEM4Q5T1C6 240 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 LRIF1Q5T3J3 769 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 BCL2L15Q5TBC7 163 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CDCP2Q5VXM1 449 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 NCBP2-AS2Q69YL0 99 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 VASNQ6EMK4 673 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 EIF5AL1Q6IS14 154 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ABHD17CQ6PCB6 329 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CNIH2Q6PI25 160 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PRSS55Q6UWB4 352 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 LCLAT1Q6UWP7 414 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ENPP6Q6UWR7 440 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ALKAL1Q6UXT8 129 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 IL34Q6ZMJ4 242 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CYHR1Q6ZMK1 362 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GCNT7Q6ZNI0 430 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 DCXRQ7Z4W1 244 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 WDR53Q7Z5U6 358 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TPRA1Q86W33 373 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ANKRD46Q86W74 232 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ANGPTL5Q86XS5 388 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CEP97Q8IW35 865 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SLC30A8Q8IWU4 369 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PHACTR4Q8IZ21 702 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 KIAA0319LQ8IZA0 1049 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 LINC00471Q8N535 108 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZBTB2Q8N680 514 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 NANOGP1Q8N7R0 232 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 DCBLD1Q8N8Z6 715 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GPR26Q8NDV2 337 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 BEND2Q8NDZ0 799 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 DNAAF1Q8NEP3 725 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 B3GNT7Q8NFL0 401 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 OR1S1Q8NH92 325 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 THAP6Q8TBB0 222 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FAM110BQ8TC76 370 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PPP1R14AQ96A00 147 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 EXOSC8Q96B26 276 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PABPC5Q96DU9 382 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RAB3CQ96E17 227 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MALSU1Q96EH3 234 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM176AQ96HP8 235 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ITCHQ96J02 903 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 OR2A7Q96R45 310 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GFM1Q96RP9 751 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CCNL2Q96S94 520 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PEBP4Q96S96 227 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PKMYT1Q99640 499 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF559Q9BR84 538 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 THAP7Q9BT49 309 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MRI1Q9BV20 369 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SNRNP25Q9BV90 132 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RIOK2Q9BVS4 552 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SGPP1Q9BX95 441 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 BARHL1Q9BZE3 327 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CPVLQ9H3G5 476 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ELAC1Q9H777 363 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GBA2Q9HCG7 927 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HHATLQ9HCP6 504 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FZD3Q9NPG1 666 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CTPS2Q9NRF8 586 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SLC22A11Q9NSA0 550 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms