RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FUT7Q11130 342 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 EBPQ15125 230 aaKnown RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SPATS1Q496A3 300 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 Q6ZPB1 254 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SPDL1Q96EA4 605 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 MAGED4Q96JG8 741 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 WWTR1Q9GZV5 400 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 AIG1Q9NVV5 245 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 TMEM45AQ9NWC5 275 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SIRT5Q9NXA8 310 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 GPR45Q9Y5Y3 372 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 NINQ8N4C6 2090 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 PRORSD1PA6NEY8 169 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-203ENST00000468565 PORP16435 677 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-203ENST00000468565 PAX7P23759 505 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 HSPA13P48723 471 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 GPR85P60893 370 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 GALNT18Q6P9A2 607 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 MAMDC2Q7Z304 686 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-203ENST00000468565 DOK4Q8TEW6 326 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 SACM1LQ9NTJ5 587 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 DEPPQ9NTK1 212 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 PSME2Q9UL46 239 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 AP4S1Q9Y587 144 aa13.34□□□□□ -0.27
COL27A1-203ENST00000468565 CLDN1O95832 211 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ATP1B1P05026 303 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 CAPN3P20807 821 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 GSTM5P46439 218 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 PDCD4Q53EL6 469 aaKnown RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 MTFR2Q6P444 385 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 LYPD8Q6UX82 237 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 RETREG3Q86VR2 466 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 DHFR2Q86XF0 187 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 OR2M7Q8NG81 312 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 OR7G1Q8NGA0 311 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 C11orf24Q96F05 449 aaPredicted RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 DUS3LQ96G46 650 aaKnown RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 APIPQ96GX9 242 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 GAL3ST4Q96RP7 486 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 PKP2Q99959 881 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 PCDHAC1Q9H158 963 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 A1L4Q6 167 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 CCL21O00585 134 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 PCDH7O60245 1069 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 CT62P0C5K7 136 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 LINGO3P0C6S8 592 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 DRD2P14416 443 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 CNR1P21554 472 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 NT5EP21589 574 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 SSTR4P31391 388 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 TIA1P31483 386 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 HMGCS1Q01581 520 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ATP6AP1LQ52LC2 224 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF615Q8N8J6 731 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ZNF441Q8N8Z8 693 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 TP53INP1Q96A56 240 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 SPACA9Q96E40 222 aaPredicted RBP13.33□□□□□ -0.28
COL27A1-203ENST00000468565 FAM173AQ9BQD7 235 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 BRINP2Q9C0B6 783 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 SH2D2AQ9NP31 389 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 ABCD2Q9UBJ2 740 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 RAB26Q9ULW5 256 aa13.33□□□□□ -0.28
COL27A1-203ENST00000468565 NBPF19A0A087WUL8 3843 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 A0A1W2PP18 115 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 TCRBV3S1A0A5B6 114 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 CYSRT1A8MQ03 144 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 ACOT7O00154 380 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 ZG16O60844 167 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 SLC22A3O75751 556 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 P04436 131 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 FBXO45P0C2W1 286 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 SLC7A1P30825 629 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 RFC3P40938 356 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 MAP4K2Q12851 820 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 BNIP2Q12982 314 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 C3AR1Q16581 482 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 CHERPQ8IWX8 916 aaKnown RBP13.32□□□□□ -0.28
COL27A1-203ENST00000468565 TAGAPQ8N103 731 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 MMP21Q8N119 569 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 LILRA2Q8N149 483 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 C17orf47Q8NEP4 570 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
COL27A1-203ENST00000468565 OR10A5Q9H207 317 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms