RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ZC3HAV1LQ96H79 300 aaKnown RBP11.8□□□□□ -0.52
PTPN7-207ENST00000468385 ANKRA2Q9H9E1 313 aa11.8□□□□□ -0.52
PTPN7-207ENST00000468385 FARSBQ9NSD9 589 aaKnown RBP11.8□□□□□ -0.52
PTPN7-207ENST00000468385 RNF14Q9UBS8 474 aa11.8□□□□□ -0.52
PTPN7-207ENST00000468385 PSME2Q9UL46 239 aa11.8□□□□□ -0.52
PTPN7-207ENST00000468385 SLC12A4Q9UP95 1085 aa11.8□□□□□ -0.52
PTPN7-207ENST00000468385 FBN1P35555 2871 aaKnown RBP11.8□□□□□ -0.52
PTPN7-207ENST00000468385 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CSPG4Q6UVK1 2322 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 H0YC42 278 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 EMC8O43402 210 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 PDYNP01213 254 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ALDOAP04075 364 aaKnown RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CD8BP10966 210 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 PAX1P15863 534 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ALDH9A1P49189 494 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 PLTPP55058 493 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 TPD52P55327 224 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 DSCR4P56555 118 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CORO7P57737 925 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 EFR3AQ14156 821 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZDHHC24Q6UX98 284 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CHMP1BQ7LBR1 199 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CCDC25Q86WR0 208 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 CCDC116Q8IYX3 515 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 FADS6Q8N9I5 356 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZNF610Q8N9Z0 462 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 OR4F6Q8NGB9 312 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZNF675Q8TD23 568 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 TRIM44Q96DX7 344 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZNF845Q96IR2 970 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-207ENST00000468385 VSTM2LQ96N03 204 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 SLC39A3Q9BRY0 314 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ELOVL6Q9H5J4 265 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZNF780BQ9Y6R6 833 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 DSCAMO60469 2012 aa11.79□□□□□ -0.52
PTPN7-207ENST00000468385 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 STX16-NPEPL1H3BU86 382 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 STX16O14662 325 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 TNFRSF21O75509 655 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 BCAS2O75934 225 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 IL12BP29460 328 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 TYK2P29597 1187 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 KCNJ5P48544 419 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 PNLIPRP2P54317 469 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 TRA2BP62995 288 aaKnown RBP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 TRADDQ15628 312 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 ANKRD34AQ69YU3 496 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 RPS27LQ71UM5 84 aaKnown RBP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 MEIOBQ8N635 442 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 OR2M3Q8NG83 312 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 OR4K17Q8NGC6 315 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 OR4N2Q8NGD1 307 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 EFHD2Q96C19 240 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
PTPN7-207ENST00000468385 FAIM2Q9BWQ8 316 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 VPS11Q9H270 941 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 DSN1Q9H410 356 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 BRF2Q9HAW0 419 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
PTPN7-207ENST00000468385 TLN2Q9Y4G6 2542 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 PPP6CO00743 305 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 THBDP07204 575 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 HK1P19367 917 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 EVI2BP34910 448 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 KRT20P35900 424 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 SERPINB8P50452 374 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
PTPN7-207ENST00000468385 CAV1Q03135 178 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 KRTAP1-1Q07627 177 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.53
PTPN7-207ENST00000468385 RAET1LQ5VY80 246 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 LETMD1Q6P1Q0 360 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 PLEKHM3Q6ZWE6 761 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 C1orf52Q8N6N3 182 aaKnown RBP11.77□□□□□ -0.53
PTPN7-207ENST00000468385 SPATA4Q8NEY3 305 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 OR9A2Q8NGT5 310 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 KAT2AQ92830 837 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 CAVIN3Q969G5 261 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 ERP27Q96DN0 273 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 PINK1Q9BXM7 581 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 FOLH1BQ9HBA9 442 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 PFDN4Q9NQP4 134 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF701Q9NV72 531 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-207ENST00000468385 PPP4R1LQ9P1A2 415 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 XPR1Q9UBH6 696 aa11.77□□□□□ -0.53
PTPN7-207ENST00000468385 ZNF225Q9UK10 706 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms