RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZG16BQ96DA0 208 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 OR6C1Q96RD1 312 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF184Q99676 751 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 TREX2Q9BQ50 279 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 DOHHQ9BU89 302 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 UGT2B28Q9BY64 529 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 CXorf21Q9HAI6 301 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 SDHAF3Q9NRP4 125 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 OAZ3Q9UMX2 235 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 SAMD4AQ9UPU9 718 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 DTX4Q9Y2E6 619 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GPC6Q9Y625 555 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ASPMQ8IZT6 3477 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GPR179Q6PRD1 2367 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ASNA1O43681 348 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ONECUT2O95948 504 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GP1BAP07359 652 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 FASP25445 335 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 GRK6P43250 576 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 DSG2Q14126 1118 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 EXOSC7Q15024 291 aaKnown RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF362Q5T0B9 420 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-208ENST00000468300 RHBDD2Q6NTF9 364 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 LAPTM4BQ86VI4 370 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 PARD6AQ9NPB6 346 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 TOR4AQ9NXH8 423 aa7.7□□□□□ -1.18
BRCA1-208ENST00000468300 A0A1B0GX78 115 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 AGRPO00253 132 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CDK2AP1O14519 115 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CNOT3O75175 753 aaKnown RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 BMP10O95393 424 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF682O95780 498 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 RORAP35398 523 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 AVPR1BP47901 424 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PCP4P48539 62 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PRIM2P49643 509 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 EMDP50402 254 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 DUSP5Q16690 384 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 FAM214AQ32MH5 1076 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 INTS11Q5TA45 600 aaKnown RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CDC73Q6P1J9 531 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CCDC81Q6ZN84 652 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 HS3ST5Q8IZT8 346 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PTPMT1Q8WUK0 201 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZFAND2BQ8WV99 257 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 DNAJC9Q8WXX5 260 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF597Q96LX8 424 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 MS4A4EQ96PG1 132 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 DPYSL5Q9BPU6 564 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 MESP1Q9BRJ9 268 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ACTRT3Q9BYD9 372 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ALOXE3Q9BYJ1 711 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SLC38A1Q9H2H9 487 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 BCL2L10Q9HD36 194 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 GIMAP4Q9NUV9 329 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 IL20Q9NYY1 176 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SERTAD3Q9UJW9 196 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PADI2Q9Y2J8 665 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 IGLV3-12A0A075B6K2 115 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 BLACEA4D250 179 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SMPD2O60906 423 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 TSC22D2O75157 780 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 GMNNO75496 209 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 LDOC1O95751 146 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PRR5P85299 388 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CHRNB3Q05901 458 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 Q3ZCU0 254 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 VWA2Q5GFL6 755 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 C1orf189Q5VU69 101 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 NUP54Q7Z3B4 507 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 TSPYL5Q86VY4 417 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ST13P4Q8IZP2 240 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 TMBIM1Q969X1 311 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 OR1F2PQ96R84 312 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 GFM1Q96RP9 751 aaKnown RBP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 AMBRA1Q9C0C7 1298 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 EQTNQ9NQ60 294 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PRTFDC1Q9NRG1 225 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 FBXO34Q9NWN3 711 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 NDUFAF4Q9P032 175 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 RPS6KA6Q9UK32 745 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 A0A0G2JPF8 293 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 CENPVL1A0A0U1RR11 272 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SAC3D1A6NKF1 404 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 HNRNPCL3B7ZW38 293 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 hCG_2039718K7EN88 272 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 FLRT2O43155 660 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 FCMRO60667 390 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 DIRAS1O95057 198 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 HNRNPCL4P0DMR1 293 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 HPGDP15428 266 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 ACADSP16219 412 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 OR1E2P47887 323 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 KHKP50053 298 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 POLR2GP62487 172 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-208ENST00000468300 PLAURQ03405 335 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 FUT7Q11130 342 aa7.69□□□□□ -1.18
BRCA1-208ENST00000468300 SLC13A2Q13183 592 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms