RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ASNA1O43681 348 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 HMGN2P05204 90 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 VIMP08670 466 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 ALOX5P09917 674 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 ACP2P11117 423 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 UQCRC2P22695 453 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 KRT20P35900 424 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 RFC3P40938 356 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 ZFP36L2P47974 494 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 DNASE1L1P49184 302 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 TDGF1P3P51864 188 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 POLR2JP52435 117 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 PPIAP62937 165 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 IRX1P78414 480 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 MRPS22P82650 360 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 LRRC74AQ0VAA2 488 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 DECR1Q16698 335 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 PRAMEF20Q5VT98 475 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 BHLHB9Q6PI77 547 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 SZRD1Q7Z422 152 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 C6orf120Q7Z4R8 191 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 SLC16A11Q8NCK7 471 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 OR4A15Q8NGL6 344 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 GOT1L1Q8NHS2 421 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 NODALQ96S42 347 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 ACTRT3Q9BYD9 372 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 FGFR1OP2Q9NVK5 253 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 TMEM45AQ9NWC5 275 aa12.49□□□□□ -0.41
SSBP1-206ENST00000467681 TUBA8Q9NY65 449 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 MRTO4Q9UKD2 239 aaKnown RBP12.49□□□□□ -0.41
SSBP1-206ENST00000467681 PCNX1Q96RV3 2341 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 FAM234BA2RU67 622 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 TRIM3O75382 744 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 IL33O95760 270 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 ZNF24P17028 368 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 GNLYP22749 145 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 MAN2A2P49641 1150 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 ATP4BP51164 291 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 STX1BP61266 288 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 KCNJ2P63252 427 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 PLGLB1Q02325 96 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 SNTA1Q13424 505 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 TP53BP2Q13625 1128 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 LASP1Q14847 261 aaKnown RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 DUSP5Q16690 384 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 SLC30A6Q6NXT4 461 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 CDC73Q6P1J9 531 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 BNC2Q6ZN30 1099 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 SLC22A16Q86VW1 577 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 OR9I1Q8NGQ6 314 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 PIK3R3Q92569 461 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 SLC9A6Q92581 669 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 EFHD2Q96C19 240 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 GPR137Q96N19 417 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 RILPQ96NA2 401 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 ZNF317Q96PQ6 595 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 STACQ99469 402 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 YIPF4Q9BSR8 244 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 INPP5KQ9BT40 448 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 PIGUQ9H490 435 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 ZFP64Q9NPA5 681 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 DUSP22Q9NRW4 184 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 SEC14L3Q9UDX4 400 aa12.48□□□□□ -0.41
SSBP1-206ENST00000467681 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 FAF1Q9UNN5 650 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-206ENST00000467681 A0A0G2JND7 137 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 CCDC154A6NI56 674 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 ICOSLGO75144 302 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 KCNH1O95259 989 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 IGKV1D-16P01601 117 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 KRT16P08779 473 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 TROVE2P10155 538 aaKnown RBP eCLIP12.47□□□□□ -0.41
SSBP1-206ENST00000467681 CYP4B1P13584 511 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 IL12BP29460 328 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 PTGDSP41222 190 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 PSMD4P55036 377 aaKnown RBP12.47□□□□□ -0.41
SSBP1-206ENST00000467681 KCNC4Q03721 635 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 MRPL49Q13405 166 aaKnown RBP12.47□□□□□ -0.41
SSBP1-206ENST00000467681 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 GFRALQ6UXV0 394 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 MSANTD1Q6ZTZ1 278 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 CLEC4FQ8N1N0 589 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 TMEM251Q8N6I4 163 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 OR5AK3PQ8NH89 298 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 ADAMTS15Q8TE58 950 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 RNF138Q8WVD3 245 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 BTBD2Q9BX70 525 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 TTTY12Q9BZ98 90 aa12.47□□□□□ -0.41
SSBP1-206ENST00000467681 DEFB127Q9H1M4 99 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms