RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TAGAPQ8N103 731 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 BCORP1Q8N888 145 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 GTF2H4Q92759 462 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 TMEM125Q96AQ2 219 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
APTX-213ENST00000465003 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 JSRP1Q96MG2 331 aaPredicted RBP10.92□□□□□ -0.66
APTX-213ENST00000465003 C5orf34Q96MH7 638 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 NODALQ96S42 347 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 PCDHGA10Q9Y5H3 936 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 LOC100653049A0A140TA62 436 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 GMFGO60234 142 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 KRT34O76011 436 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 CD46P15529 392 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 DRD5P21918 477 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 PTPN6P29350 595 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 ZNHIT3Q15649 155 aaPredicted RBP10.92□□□□□ -0.66
APTX-213ENST00000465003 ZSCAN26Q16670 478 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 RNFT1Q5M7Z0 435 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 SLC25A25Q6KCM7 469 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 DIO2Q92813 273 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 TP53INP1Q96A56 240 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 SLC35A4Q96G79 324 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 SLC35G5Q96KT7 338 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 OR7D2Q96RA2 312 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 LMF2Q9BU23 707 aaKnown RBP10.92□□□□□ -0.66
APTX-213ENST00000465003 Q9N2J8 555 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 GIN1Q9NXP7 522 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 NTMQ9P121 344 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 BTNL2Q9UIR0 455 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 CBLCQ9ULV8 474 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 MAPRE3Q9UPY8 281 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 PCDHB14Q9Y5E9 798 aa10.92□□□□□ -0.66
APTX-213ENST00000465003 ZNF462Q96JM2 2506 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 B8ZZF3 427 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 NME2P1O60361 137 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 ICOSLGO75144 302 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 PPM1BO75688 479 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 SLITRK5O94991 958 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 OR12D1P0DN82 309 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 MATN1P21941 496 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 NME2P22392 152 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 IL12BP29460 328 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 MEOX1P50221 254 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 TLE1Q04724 770 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 IGFBP7Q16270 282 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 NTRK2Q16620 822 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
APTX-213ENST00000465003 OR5M10Q6IEU7 315 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 MSRB3Q8IXL7 192 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 C10orf111Q8N326 155 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 COX18Q8N8Q8 333 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 CDRT4Q8N9R6 151 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 C17orf47Q8NEP4 570 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 OR56A1Q8NGH5 318 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 ARSGQ96EG1 525 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 SCMH1Q96GD3 660 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 SLC39A3Q9BRY0 314 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 RTN4RQ9BZR6 473 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 OR51I1Q9H343 314 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 SLC25A37Q9NYZ2 338 aa10.91□□□□□ -0.66
APTX-213ENST00000465003 FAF1Q9UNN5 650 aaPredicted RBP10.91□□□□□ -0.66
APTX-213ENST00000465003 RRP15Q9Y3B9 282 aaKnown RBP10.91□□□□□ -0.66
APTX-213ENST00000465003 FAM166BA8MTA8 275 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 FBP2O00757 339 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SUV39H1O43463 412 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SLC28A2O43868 658 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 PEX1O43933 1283 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 UQCRC2P22695 453 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 MAP3K8P41279 467 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 MRPL19P49406 292 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 ATP4BP51164 291 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 MRPS22P82650 360 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 KLF10Q13118 480 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 STX5Q13190 355 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 CAPRIN1Q14444 709 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 SAXO2Q658L1 398 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 RTL4Q6ZR62 310 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 NATD1Q8N6N6 113 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 HORMAD2Q8N7B1 307 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 GATSQ8NAP1 163 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 HSPBAP1Q96EW2 488 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ACTRT3Q9BYD9 372 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 NSRP1Q9H0G5 558 aaKnown RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 IKZF5Q9H5V7 419 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 TRIM45Q9H8W5 580 aaPredicted RBP10.9□□□□□ -0.66
APTX-213ENST00000465003 VAPAQ9P0L0 249 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 VPS4AQ9UN37 437 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SHANK1Q9Y566 2161 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 B4DXG7 233 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 ACOX3O15254 700 aa10.9□□□□□ -0.66
APTX-213ENST00000465003 SCO2O43819 266 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms