RNA–Protein interactions for RNA: ENST00000464702.6

PDPK1-208, Transcript of 3-phosphoinositide dependent protein kinase 1, human

TSL 2

Gene PDPK1, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPK1-208	ENST00000464702	URM1	Q9BTM9	101 aa	Known RBP	4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	CUEDC2	Q9H467	287 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	WDR76	Q9H967	626 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	CALHM2	Q9HA72	323 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	NEK6	Q9HC98	313 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	KLHL28	Q9NXS3	571 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	TMEM181	Q9P2C4	612 aa		4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.06	□□□□□ -1.76
PDPK1-208	ENST00000464702	NPHP4	O75161	1426 aa	Predicted RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	DCC	P43146	1447 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NCOA3	Q9Y6Q9	1424 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	LTN1	O94822	1766 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SH3TC1	Q8TE82	1336 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	IGKV3D-15	A0A087WSY6	115 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702		A0A087WW49	117 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	TMEM89	A2RUT3	159 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	OR6C65	A6NJZ3	312 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	GABRR3	A8MPY1	467 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ZW10	O43264	779 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	EXTL3	O43909	919 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	DFNA5	O60443	496 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	RAD51D	O75771	328 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	TGM6	O95932	706 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MBD3	O95983	291 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	GLA	P06280	429 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	GPI	P06744	558 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PRKAR1A	P10644	381 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SLC2A3	P11169	496 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	UMPS	P11172	480 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	F3	P13726	295 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CYP2B6	P20813	491 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PTN	P21246	168 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CA6	P23280	308 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NMT1	P30419	496 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MNDA	P41218	407 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	VEGFC	P49767	419 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	RGS7	P49802	495 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ARHGDIB	P52566	201 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	RIPK4	P57078	832 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	RPL23A	P62750	156 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	GSTO1	P78417	241 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ARHGAP1	Q07960	439 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	FUT7	Q11130	342 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MAB21L1	Q13394	359 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	DRP2	Q13474	957 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CUL3	Q13618	768 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NCF4	Q15080	339 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CARTPT	Q16568	116 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MTHFSD	Q2M296	383 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ATF7IP2	Q5U623	682 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	C11orf63	Q6NUN7	778 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	FBXL22	Q6P050	247 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702		Q6ZSR9	355 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	BZW1	Q7L1Q6	419 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NRARP	Q7Z6K4	114 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PHLDB2	Q86SQ0	1253 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	YRDC	Q86U90	279 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	APCDD1	Q8J025	514 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ZNF611	Q8N823	705 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	OR2T6	Q8NHC8	308 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	LKAAEAR1	Q8TD35	194 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MRGPRD	Q8TDS7	321 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SGK3	Q96BR1	496 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SENP8	Q96LD8	212 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NPY6R	Q99463	290 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NPAS2	Q99743	824 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	BBS2	Q9BXC9	721 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	MRPL13	Q9BYD1	178 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SLC2A11	Q9BYW1	496 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	NMNAT2	Q9BZQ4	307 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	VCX3B	Q9H321	246 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PSTPIP2	Q9H939	334 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CDH20	Q9HBT6	801 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	GKN1	Q9NS71	199 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	FGF21	Q9NSA1	209 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PLCXD1	Q9NUJ7	323 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SPHK1	Q9NYA1	384 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PDP1	Q9P0J1	537 aa	Predicted RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	STX18	Q9P2W9	335 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	PEF1	Q9UBV8	284 aa	Known RBP	4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CD300A	Q9UGN4	299 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	CHMP2B	Q9UQN3	213 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	WDR83OS	Q9Y284	106 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	IFT52	Q9Y366	437 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SH3GLB1	Q9Y371	365 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	TMED3	Q9Y3Q3	217 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	ABCC6	O95255	1503 aa		4.05	□□□□□ -1.76
PDPK1-208	ENST00000464702	SNED1	Q8TER0	1413 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	RGPD8	O14715	1765 aa	Predicted RBP	4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	RGPD1	P0DJD0	1748 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	HEG1	Q9ULI3	1381 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	PIK3C2A	O00443	1686 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702		A0A1W2PPW3	197 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	HEATR9	A2RTY3	570 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	FAM149A	A5PLN7	773 aa		4.04	□□□□□ -1.76
PDPK1-208	ENST00000464702	ANKRD30BL	A7E2S9	258 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 112 ms