RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 CASKO14936 926 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 TO15178 435 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 GLRA3O75311 464 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 FAM153BP0C7A2 387 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 GRK2P25098 689 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 SRD5A2P31213 254 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 MC3RP41968 323 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 CLK3P49761 638 aaKnown RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 DIO3P55073 304 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 FOXF2Q12947 444 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 KEAP1Q14145 624 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 ZNHIT3Q15649 155 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 FAM153CQ494X1 144 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 TMEM81Q6P7N7 255 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 NPSR1Q6W5P4 371 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 LCA5Q86VQ0 697 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 OR7G2Q8NG99 324 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 ACMSDQ8TDX5 336 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 SMPDL3BQ92485 455 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 L3HYPDHQ96EM0 354 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 OR2B2Q9GZK3 357 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 DSN1Q9H410 356 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 RRAGDQ9NQL2 400 aaPredicted RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 SDHAF3Q9NRP4 125 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
RPP40-203ENST00000464646 CBLCQ9ULV8 474 aa12.56□□□□□ -0.4
RPP40-203ENST00000464646 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 PRRC2AP48634 2157 aaKnown RBP12.55□□□□□ -0.4
RPP40-203ENST00000464646 PLOD2O00469 737 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SEC14L5O43304 696 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 TSPAN2O60636 221 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SEC22BO75396 215 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 CT45A8P0DMV1 189 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 CT45A9P0DMV2 189 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 EPXP11678 715 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 HK1P19367 917 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 DDCP20711 480 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 GPC1P35052 558 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SOX18P35713 384 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 CCT5P48643 541 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 FOXA1P55317 472 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 DECR1Q16698 335 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 CT45A2Q5DJT8 189 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 ZYG11AQ6WRX3 759 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 MEIOBQ8N635 442 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 NINJ1Q92982 152 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SLC35A4Q96G79 324 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 FAM111AQ96PZ2 611 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 BTBD9Q96Q07 612 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SFXN3Q9BWM7 321 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 STMN4Q9H169 189 aaPredicted RBP12.55□□□□□ -0.4
RPP40-203ENST00000464646 ACBD3Q9H3P7 528 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 GSTO2Q9H4Y5 243 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 Q9N2J8 555 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 EQTNQ9NQ60 294 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 MED11Q9P086 117 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 MRTO4Q9UKD2 239 aaKnown RBP12.55□□□□□ -0.4
RPP40-203ENST00000464646 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
RPP40-203ENST00000464646 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 H3BML4 177 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 IL18BPO95998 194 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 CPN1P15169 458 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 EVI2BP34910 448 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 GSTM5P46439 218 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 KCNJ5P48544 419 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 PRKAG1P54619 331 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 DSCR4P56555 118 aaPredicted RBP12.54□□□□□ -0.4
RPP40-203ENST00000464646 SIRPAP78324 504 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 HSPB3Q12988 150 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 OR5M1Q8NGP8 315 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 WNT2BQ93097 391 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 ERP27Q96DN0 273 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 TRIM44Q96DX7 344 aaPredicted RBP12.54□□□□□ -0.4
RPP40-203ENST00000464646 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 VSTM2LQ96N03 204 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 FOXC2Q99958 501 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 IQCGQ9H095 443 aaKnown RBP12.54□□□□□ -0.4
RPP40-203ENST00000464646 PTGES2Q9H7Z7 377 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 GALNT8Q9NY28 637 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 FETUBQ9UGM5 382 aa12.54□□□□□ -0.4
RPP40-203ENST00000464646 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 UBFD1O14562 309 aaKnown RBP12.53□□□□□ -0.4
RPP40-203ENST00000464646 COPEO14579 308 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 AKAP10O43572 662 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 PLOD3O60568 738 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 RCBTB2O95199 551 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 PEPDP12955 493 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 CHMP24386 653 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
RPP40-203ENST00000464646 PSPHP78330 225 aa12.53□□□□□ -0.4
RPP40-203ENST00000464646 GAB1Q13480 694 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms