RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF699Q32M78 642 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 PRSS48Q7RTY5 328 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 AMZ2Q86W34 360 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 OTUD6BQ8N6M0 293 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 ZNF397Q8NF99 534 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-205ENST00000464541 OR4F17Q8NGA8 305 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 FAM122AQ96E09 287 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 C11orf24Q96F05 449 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-205ENST00000464541 PHYHIPLQ96FC7 376 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 OR4F4Q96R69 305 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 COQ7Q99807 217 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 MAPKAP1Q9BPZ7 522 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 TEX13BQ9BXU2 312 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 NDUFA13Q9P0J0 144 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 ADAM22Q9P0K1 906 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 SH3BGRL2Q9UJC5 107 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 RAD54L2Q9Y4B4 1467 aa4.22□□□□□ -1.73
PTCD3-205ENST00000464541 PRRC2AP48634 2157 aaKnown RBP4.21□□□□□ -1.73
PTCD3-205ENST00000464541 ZBTB14O43829 449 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 LYPD3O95274 346 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 GAP43P17677 238 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 PRPHP41219 470 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 CD86P42081 329 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 STK19P49842 368 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-205ENST00000464541 NT5C2P49902 561 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 P2RY4P51582 365 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 IL1RL1Q01638 556 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 PARP6Q2NL67 630 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 CCDC26Q8TAB7 109 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 PHYHIPQ92561 330 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 CFAP53Q96M91 514 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-205ENST00000464541 ZIM3Q96PE6 472 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 TNMDQ9H2S6 317 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 ABCB10Q9NRK6 738 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 NYAP2Q9P242 653 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 KCNN3Q9UGI6 736 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 APOBEC3BQ9UH17 382 aaKnown RBP4.21□□□□□ -1.74
PTCD3-205ENST00000464541 KLHL21Q9UJP4 597 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 ZNF490Q9ULM2 529 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-205ENST00000464541 BARX2Q9UMQ3 279 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-205ENST00000464541 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 PLEKHA6Q9Y2H5 1048 aa4.21□□□□□ -1.74
PTCD3-205ENST00000464541 TMEM89A2RUT3 159 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 EPOPA6NHQ4 379 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 HDAC3O15379 428 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 SEC22BO75396 215 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 STAM2O75886 525 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 PGK2P07205 417 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ALPIP09923 528 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 KRT13P13646 458 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ZNF19P17023 458 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ZBTB25P24278 435 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 TNNT2P45379 298 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-205ENST00000464541 POLR2FP61218 127 aaKnown RBP4.2□□□□□ -1.74
PTCD3-205ENST00000464541 HERVK_113P63132 956 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ERVK-8P63133 956 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 CBX3Q13185 183 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 SERTAD2Q14140 314 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 BTG3Q14201 252 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-205ENST00000464541 CAMK4Q16566 473 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ZNF658Q5TYW1 1059 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-205ENST00000464541 IL23RQ5VWK5 629 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 MEDAGQ5VYS4 303 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 GALNT17Q6IS24 598 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 LEG1Q6P5S2 330 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 VPS36Q86VN1 386 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 URGCPQ8TCY9 931 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 DNAJA3Q96EY1 480 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ZNF414Q96IQ9 312 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 TSGA13Q96PP4 275 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 C19orf24Q9BVV8 132 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 ERVK-6Q9BXR3 956 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 BCAP29Q9UHQ4 241 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 DNPEPQ9ULA0 475 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 FZR1Q9UM11 496 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 KIF3AQ9Y496 699 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 FKBP7Q9Y680 259 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 GRIN2DO15399 1336 aa4.2□□□□□ -1.74
PTCD3-205ENST00000464541 A0A0U1RRA0 63 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 KRT87PA6NCN2 255 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 FRG2CA6NGY1 282 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 RAMP1O60894 148 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 NOL3O60936 208 aaKnown RBP4.19□□□□□ -1.74
PTCD3-205ENST00000464541 SLC35G4P0C7Q5 338 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 RPS2P15880 293 aaKnown RBP4.19□□□□□ -1.74
PTCD3-205ENST00000464541 ZP3P21754 424 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 IL10P22301 178 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 IDSP22304 550 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 RIPPLY3P57055 190 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 LRRC74AQ0VAA2 488 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 ZKSCAN8Q15776 578 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-205ENST00000464541 LRIT3Q3SXY7 679 aa4.19□□□□□ -1.74
PTCD3-205ENST00000464541 GLYR1Q49A26 553 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-205ENST00000464541 AGKQ53H12 422 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms