RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SLC1A5Q15758 541 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 PPP1R3AQ16821 1122 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 LRRC8BQ6P9F7 803 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 AFTPHQ6ULP2 937 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 WASH2PQ6VEQ5 465 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 LPCAT2Q7L5N7 544 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 SERINC5Q86VE9 423 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 CCDC36Q8IYA8 594 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 FNDC8Q8TC99 324 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 AGAP11Q8TF27 550 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 TADA1Q96BN2 335 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 ELMO2Q96JJ3 720 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 C16orf45Q96MC5 204 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 C1orf147Q96MC9 270 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 C9orf85Q96MD7 179 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 MCCC1Q96RQ3 725 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 APOL2Q9BQE5 337 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 C1orf123Q9NWV4 160 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 ARMCX1Q9P291 453 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 ATXN10Q9UBB4 475 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 NTNG1Q9Y2I2 539 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 RNF115Q9Y4L5 304 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 COL5A2P05997 1499 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 GRIN2DO15399 1336 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 A0A087WZY1 265 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 IGKV3D-20A0A0C4DH25 116 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 H0YL77 283 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 CHADO15335 359 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 GPRIN2O60269 458 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 RHBDL1O75783 438 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 IGHG3P01860 377 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 WNT2P09544 360 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 GSTT2P0CG29 244 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 GSTT2BP0CG30 244 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 THRBP10828 461 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 UQCRBP14927 111 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 IGFBP5P24593 272 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 AXLP30530 894 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 HMGCLP35914 325 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 TRPC1P48995 793 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EMDP50402 254 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 POLR2FP61218 127 aaKnown RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 OSTNP61366 133 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 DMTNQ08495 405 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EXOSC2Q13868 293 aaKnown RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 SLC10A1Q14973 349 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 ZIC1Q15915 447 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 C15orf32Q32M92 178 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 ADPRMQ3LIE5 342 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EIPR1Q53HC9 387 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 FBXL22Q6P050 247 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 PNCKQ6P2M8 343 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 GET4Q7L5D6 327 aaPredicted RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 CDC20BQ86Y33 519 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EFCAB13Q8IY85 973 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 LYG1Q8N1E2 194 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 MNS1Q8NEH6 495 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 NFAM1Q8NET5 270 aaPredicted RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF671Q8TAW3 534 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 ITFG2Q969R8 447 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 C11orf24Q96F05 449 aaPredicted RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 CFAP53Q96M91 514 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 VSTM2LQ96N03 204 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 FOXN4Q96NZ1 517 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 VPS35Q96QK1 796 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 TBCDQ9BTW9 1192 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 TBC1D10AQ9BXI6 508 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 CCSER1Q9C0I3 900 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 LPAR2Q9HBW0 351 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 IMPAD1Q9NX62 359 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 DHRS4-AS1Q9P1J3 65 aa2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EIF3LQ9Y262 564 aaKnown RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 EXOSC1Q9Y3B2 195 aaKnown RBP2.87□□□□□ -1.95
HMGXB4-205ENST00000464480 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 A0A0U1RQV5 110 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 ZSCAN5CA6NGD5 496 aaPredicted RBP2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 LRRC30A6NM36 301 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 WASHC1A8K0Z3 465 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 VGLL3A8MV65 326 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 SRRM5B3KS81 715 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 MPHOSPH10O00566 681 aaKnown RBP2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 IMPA2O14732 288 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 LCMT2O60294 686 aaKnown RBP2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF354AO60765 605 aaPredicted RBP2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 HMMRO75330 724 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF253O75346 499 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 VENTXO95231 258 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 ANP32DO95626 131 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 APBB3O95704 486 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 AK1P00568 194 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 KRT6BP04259 564 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 H2AFZP0C0S5 128 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 CALCBP10092 127 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 H2AFXP16104 143 aaPredicted RBP2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 DESP17661 470 aa2.86□□□□□ -1.95
HMGXB4-205ENST00000464480 SDC1P18827 310 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms