RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PIK3CBP42338 1070 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 SERPINB9P50453 376 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 NEK2P51955 445 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 AP2B1P63010 937 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 SKP1P63208 163 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TNFRSF17Q02223 184 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ID2Q02363 134 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 SLAMF1Q13291 335 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 FHL1Q13642 323 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 FAM83EQ2M2I3 478 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 GGTA1PQ4G0N0 100 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TMEM35AQ53FP2 167 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 MTX3Q5HYI7 312 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 PAGE2BQ5JRK9 111 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 RUSC1-AS1Q66K80 236 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 C18orf63Q68DL7 685 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 OR4C11Q6IEV9 310 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 METTL2BQ6P1Q9 378 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 FAM180AQ6UWF9 173 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TIFABQ6ZNK6 161 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 GALNTL5Q7Z4T8 443 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 MDGA2Q7Z553 956 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ZNF595Q8IYB9 648 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ZCCHC7Q8N3Z6 543 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 CPSF7Q8N684 471 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 SLC5A8Q8N695 610 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ZNF721Q8TF20 911 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 SARAFQ96BY9 339 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 PHF21BQ96EK2 531 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 VMP1Q96GC9 406 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 BOD1Q96IK1 185 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 CLUHP3Q96NS8 147 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TMEM237Q96Q45 408 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 MTERF1Q99551 399 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 TIMP4Q99727 224 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 UTP23Q9BRU9 249 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 TBCDQ9BTW9 1192 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 NTMT1Q9BV86 223 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 DDX31Q9H8H2 851 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 GALNT9Q9HCQ5 603 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 SH2D2AQ9NP31 389 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 KLHL1Q9NR64 748 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 PNO1Q9NRX1 252 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 AGPAT4Q9NRZ5 378 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 FARSBQ9NSD9 589 aaKnown RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 DEPPQ9NTK1 212 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TEX10Q9NXF1 929 aaPredicted RBP4.92□□□□□ -1.62
CD46-211ENST00000464082 PSD3Q9NYI0 1048 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 TMEM216Q9P0N5 145 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 LRFN1Q9P244 771 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 EMCNQ9ULC0 261 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 OSGIN2Q9Y236 505 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ZNF835Q9Y2P0 537 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ATG4BQ9Y4P1 393 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 POLQO75417 2590 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 ABCA4P78363 2273 aa4.92□□□□□ -1.62
CD46-211ENST00000464082 FREM1Q5H8C1 2179 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 MED13LQ71F56 2210 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 KIF2AO00139 706 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 PSMD12O00232 456 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 FOXE1O00358 373 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 PGRMC2O15173 223 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 LRRTM2O43300 516 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 PROM1O43490 865 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 ZG16O60844 167 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 SLC25A12O75746 678 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 OR6B1O95007 311 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 UNC5CO95185 931 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 AIFM1O95831 613 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 GBAP04062 536 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 S100BP04271 92 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 TUBB4AP04350 444 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 SP1P08047 785 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 INHBAP08476 426 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 SNRPAP09012 282 aaKnown RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 RBP1P09455 135 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 RHOXF2BP0C7M4 288 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 TSPAN8P19075 237 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 CNTFP26441 200 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 SERPINB1P30740 379 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 CA7P43166 264 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 SSR2P43308 183 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 HLCSP50747 726 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 CLCN2P51788 898 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 ARFIP1P53367 373 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 CDH13P55290 713 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 ADORA2A-AS1P86434 159 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 FOLH1Q04609 750 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 ACTN3Q08043 901 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 GALNT1Q10472 559 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 TBL3Q12788 808 aaKnown RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 SLC13A2Q13183 592 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 CUL3Q13618 768 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 DDX39BQ13838 428 aaKnown RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 SLC29A2Q14542 456 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 ZRSR2Q15696 482 aaKnown RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 HIST2H2ACQ16777 129 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 UNC50Q53HI1 259 aa4.91□□□□□ -1.62
CD46-211ENST00000464082 TCHHL1Q5QJ38 904 aaPredicted RBP4.91□□□□□ -1.62
CD46-211ENST00000464082 HIST2H2AA3Q6FI13 130 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms