RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RAD51CO43502 376 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 BCAS2O75934 225 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-210ENST00000464078 SERPINB8P50452 374 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 PNLIPRP2P54317 469 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 DSCR4P56555 118 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-210ENST00000464078 TRA2BP62995 288 aaKnown RBP15.6■□□□□ 0.09
HMGN1-210ENST00000464078 GUSBP1Q15486 140 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 CCDC25Q86WR0 208 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 FBXO25Q8TCJ0 367 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 ADOQ96SZ5 270 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 FAIM2Q9BWQ8 316 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 OPN3Q9H1Y3 402 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-210ENST00000464078 RNF122Q9H9V4 155 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 SLC12A4Q9UP95 1085 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 ZNF780BQ9Y6R6 833 aa15.6■□□□□ 0.09
HMGN1-210ENST00000464078 C16orf97H3BN30 126 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 TMCC2O75069 709 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 POU2F1P14859 743 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 TYK2P29597 1187 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 PTH2RP49190 550 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 PLTPP55058 493 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 CLDN15P56746 228 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 CORO7P57737 925 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 EEFSECP57772 596 aaKnown RBP15.59■□□□□ 0.09
HMGN1-210ENST00000464078 OCRLQ01968 901 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 CHMP1BQ7LBR1 199 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 MEIOBQ8N635 442 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 FADS6Q8N9I5 356 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 ZNF845Q96IR2 970 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-210ENST00000464078 NSUN5Q96P11 429 aaKnown RBP15.59■□□□□ 0.09
HMGN1-210ENST00000464078 ADAM21Q9UKJ8 722 aa15.59■□□□□ 0.09
HMGN1-210ENST00000464078 LINC01387J3KSC0 135 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 TNFRSF21O75509 655 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 CNOT4O95628 575 aaKnown RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 RPS17P08708 135 aaKnown RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 RBP1P09455 135 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 IL12BP29460 328 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 KRT20P35900 424 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 MRPS22P82650 360 aaKnown RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 GANABQ14697 944 aaKnown RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 OR5M10Q6IEU7 315 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 ZDHHC24Q6UX98 284 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 NPSR1Q6W5P4 371 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 LARP4Q71RC2 724 aaKnown RBP eCLIP15.58■□□□□ 0.081e-8■■■■■ 31.7
HMGN1-210ENST00000464078 SAMD14Q8IZD0 417 aaPredicted RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 OR4F6Q8NGB9 312 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 OR4K17Q8NGC6 315 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 FIG4Q92562 907 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 PHF21BQ96EK2 531 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 FARSBQ9NSD9 589 aaKnown RBP15.58■□□□□ 0.08
HMGN1-210ENST00000464078 NMRK1Q9NWW6 199 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 UTS2RQ9UKP6 389 aa15.58■□□□□ 0.08
HMGN1-210ENST00000464078 OTCP00480 354 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 PDYNP01213 254 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 MAGEA12P43365 314 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 ALDH9A1P49189 494 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 SGO1Q5FBB7 561 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 FAM180BQ6P0A1 224 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 LETMD1Q6P1Q0 360 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 PLEKHM3Q6ZWE6 761 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF550Q7Z398 422 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 MILR1Q7Z6M3 343 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 UBQLNLQ8IYU4 475 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 PLD6Q8N2A8 252 aaKnown RBP15.57■□□□□ 0.08
HMGN1-210ENST00000464078 C1orf52Q8N6N3 182 aaKnown RBP15.57■□□□□ 0.08
HMGN1-210ENST00000464078 LRRN4CLQ8ND94 238 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 PIGQQ9BRB3 760 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 SHCBP1LQ9BZQ2 653 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF701Q9NV72 531 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-210ENST00000464078 PPP4R1LQ9P1A2 415 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 SNX6Q9UNH7 406 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 ABCG2Q9UNQ0 655 aa15.57■□□□□ 0.08
HMGN1-210ENST00000464078 UTP11Q9Y3A2 253 aaKnown RBP15.57■□□□□ 0.08
HMGN1-210ENST00000464078 CHD3Q12873 2000 aaKnown RBP15.56■□□□□ 0.08
HMGN1-210ENST00000464078 PLOD3O60568 738 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 FCGR2AP12318 317 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 HSD3B1P14060 373 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 PPP3CBP16298 524 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 TCEA1P23193 301 aaKnown RBP15.56■□□□□ 0.08
HMGN1-210ENST00000464078 HSD3B2P26439 372 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 EVI2BP34910 448 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 KCNJ5P48544 419 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 SIRPAP78324 504 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 BEX5Q5H9J7 111 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 RAET1LQ5VY80 246 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 C22orf34Q6ZV56 151 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 OR2M3Q8NG83 312 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 FNDC9Q8TBE3 224 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF483Q8TF39 744 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-210ENST00000464078 SELENOMQ8WWX9 145 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 C1QTNF3Q9BXJ4 246 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 PINK1Q9BXM7 581 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 RAB17Q9H0T7 212 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 STMN4Q9H169 189 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-210ENST00000464078 VPS11Q9H270 941 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 ANKRA2Q9H9E1 313 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 FOLH1BQ9HBA9 442 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 XPR1Q9UBH6 696 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms