RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CYP2A7P20853 494 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MAGP20916 626 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GGT5P36269 586 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 HALP42357 657 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RAB28P51157 221 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ALDH18A1P54886 795 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 DNAJB13P59910 316 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RPS18P62269 152 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RPS15P62841 145 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 HERVK_113P63132 956 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GNGT1P63211 74 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CBX1P83916 185 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CDKL1Q00532 357 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GTF2H2Q13888 395 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LARS2Q15031 903 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 DEFB110Q30KQ9 67 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 UGT3A2Q3SY77 523 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC153Q494R4 210 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 HSP90B2PQ58FF3 399 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TMTC4Q5T4D3 741 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RNF220Q5VTB9 566 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SULT1C3Q6IMI6 304 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PWWP2BQ6NUJ5 590 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GTF2H2CQ6P1K8 395 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FAM199XQ6PEV8 388 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CLEC9AQ6UXN8 241 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TMPRSS11BQ86T26 416 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SLC9B2Q86UD5 537 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CUZD1Q86UP6 607 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 AMIGO1Q86WK6 493 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NUDCD3Q8IVD9 361 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SYTL1Q8IYJ3 562 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 TBC1D21Q8IYX1 336 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MMP21Q8N119 569 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SNX31Q8N9S9 440 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR4F6Q8NGB9 312 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR2L8Q8NGY9 312 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ITLN2Q8WWU7 325 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RAD51AP1Q96B01 352 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CXorf40BQ96DE9 158 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 SLC41A2Q96JW4 573 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 PPP1R36Q96LQ0 422 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 C3orf30Q96M34 536 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC138Q96M89 665 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OR2A14Q96R47 310 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 EBF4Q9BQW3 602 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 WACQ9BTA9 647 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ERVK-6Q9BXR3 956 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 RAB33BQ9H082 229 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 IQCGQ9H095 443 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 STMN4Q9H169 189 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 KCNK13Q9HB14 408 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 CHST11Q9NPF2 352 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 POT1Q9NUX5 634 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 FGFR1OP2Q9NVK5 253 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 GPR83Q9NYM4 423 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 NKIRAS1Q9NYS0 192 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 OSGIN2Q9Y236 505 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 BTRCQ9Y297 605 aa3.38□□□□□ -1.87
SCFD1-204ENST00000463622 MRPS2Q9Y399 296 aaKnown RBP3.38□□□□□ -1.87
SCFD1-204ENST00000463622 LOC105369274A0A096LPK9 316 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 KIR2DS5A0A0G2JLQ3 304 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 A0A0G2JNG1 304 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 LOC102723532A0A0G2JNH3 316 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 OR5K3A6NET4 321 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 ISM1B1AKI9 464 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 K7EPI3 171 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 KIR2DS3K7RE56 304 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SOCS2O14508 198 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 HAT1O14929 419 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 BIRC5O15392 142 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 P2RX6O15547 441 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 EDF1O60869 148 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DIAPH2O60879 1101 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 KCNJ13O60928 360 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DNAJB6O75190 326 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SMIM24O75264 130 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SKAP2O75563 359 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 STK16O75716 305 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CAPN1P07384 714 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 ANXA5P08758 320 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 FOLR1P15328 257 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SSTR2P30874 369 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 GABRA4P48169 554 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SLC1A6P48664 564 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 AP1S2P56377 157 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 ABCE1P61221 599 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CSNK1G2P78368 415 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DOC2AQ14183 400 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 RCN2Q14257 317 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 KIR2DS5Q14953 304 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MFSD13AQ14CX5 517 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SLC9B1Q4ZJI4 515 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 FRMPD2BQ6IN97 320 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 LCN10Q6JVE6 187 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 KLC3Q6P597 504 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms