RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 NME6O75414 186 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-204ENST00000463487 SNX4O95219 450 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 KRT75O95678 551 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 ZNF24P17028 368 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 TRPC1P48995 793 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 GYS2P54840 703 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 TLE1Q04724 770 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 GAB1Q13480 694 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 C6orf120Q7Z4R8 191 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 WDR53Q7Z5U6 358 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-204ENST00000463487 CPSF7Q8N684 471 aaKnown RBP18.2■□□□□ 0.5
COL9A3-204ENST00000463487 SLC16A11Q8NCK7 471 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 OR2M7Q8NG81 312 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 FBXO30Q8TB52 745 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 GRHL3Q8TE85 626 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 TSPEARQ8WU66 669 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 FAR1Q8WVX9 515 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 VPS33AQ96AX1 596 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 DTNBP1Q96EV8 351 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 RMND5BQ96G75 393 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-204ENST00000463487 ADOQ96SZ5 270 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 YIPF4Q9BSR8 244 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 DOHHQ9BU89 302 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 SH2D2AQ9NP31 389 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 OLAHQ9NV23 265 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 GPATCH2Q9NW75 528 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 TSPAN2O60636 221 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 AK1P00568 194 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ZCCHC18P0CG32 403 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ACP2P11117 423 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 MATN1P21941 496 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 LCN1P31025 176 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 MAP3K8P41279 467 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 MAGEA8P43361 318 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ZFP36L2P47974 494 aaKnown RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 CLK3P49761 638 aaKnown RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 KHKP50053 298 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 GPR85P60893 370 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 POU6F2P78424 691 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ALDH6A1Q02252 535 aaKnown RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 PLGLB1Q02325 96 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 SF3A3Q12874 501 aaKnown RBP eCLIP18.19■□□□□ 0.56e-8■■■■□ 23.9
COL9A3-204ENST00000463487 SNTA1Q13424 505 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 MAPRE2Q15555 327 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 DUSP5Q16690 384 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ATAD3BQ5T9A4 648 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 PRAMEF20Q5VT98 475 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 SAXO2Q658L1 398 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 TMEM81Q6P7N7 255 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 PACS2Q86VP3 889 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ATCAYQ86WG3 371 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 C10orf82Q8WW14 230 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 EFHD2Q96C19 240 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 NEURL3Q96EH8 262 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 C16orf58Q96GQ5 468 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ZNF597Q96LX8 424 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 FRMD6Q96NE9 622 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ELAC2Q9BQ52 826 aaKnown RBP18.19■□□□□ 0.5
COL9A3-204ENST00000463487 BTBD2Q9BX70 525 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ZNF385DQ9H6B1 395 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 EXD2Q9NVH0 621 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 ASF1BQ9NVP2 202 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 KLRF1Q9NZS2 232 aa18.19■□□□□ 0.5
COL9A3-204ENST00000463487 TFECO14948 347 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-204ENST00000463487 ANGPT2O15123 496 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 CCDC22O60826 627 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 UGT2B11O75310 529 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 IL33O95760 270 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 ATP6V1C1P21283 382 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 RFX3P48380 749 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 MASP1P48740 699 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 SEC24CP53992 1094 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 SLC30A6Q6NXT4 461 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 DNAJC14Q6Y2X3 702 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-204ENST00000463487 FUNDC1Q8IVP5 155 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 ZFP62Q8NB50 900 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-204ENST00000463487 OR4N2Q8NGD1 307 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 MIPOL1Q8TD10 442 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 PIK3R3Q92569 461 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 INPP5KQ9BT40 448 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 HHATLQ9HCP6 504 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 B4GALT7Q9UBV7 327 aa18.18■□□□□ 0.5
COL9A3-204ENST00000463487 LEF1Q9UJU2 399 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-204ENST00000463487 CNOT11Q9UKZ1 510 aaKnown RBP18.18■□□□□ 0.5
COL9A3-204ENST00000463487 BSNQ9UPA5 3926 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 A0A1W2PP18 115 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 PRAMEF25A6NGN4 478 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 SLC22A2O15244 555 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 ASNA1O43681 348 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 CASP3P42574 277 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 PMP22Q01453 160 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 PRR30Q53SZ7 412 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-204ENST00000463487 SLC22A16Q86VW1 577 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 NR4A3Q92570 626 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 CDS1Q92903 461 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 HGDQ93099 445 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 OR7D2Q96RA2 312 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 TAAR6Q96RI8 345 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 OSBPL11Q9BXB4 747 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms