RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 GNG14A0A1W2PPG7 69 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 A8MXE2 369 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 DLX3O60479 287 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 ZIC3O60481 467 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 SNRPAP09012 282 aaKnown RBP14.57□□□□□ -0.08
COL7A1-204ENST00000462475 DRD2P14416 443 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 CHMP24386 653 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 DPP4P27487 766 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 KRT20P35900 424 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 B3GALT5-AS1P59052 145 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 SLC44A2Q8IWA5 706 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-204ENST00000462475 NOA1Q8NC60 698 aaKnown RBP14.57□□□□□ -0.08
COL7A1-204ENST00000462475 OR7G2Q8NG99 324 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 METTL6Q8TCB7 284 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 C16orf78Q8WTQ4 265 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 IFT81Q8WYA0 676 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 SMPDL3BQ92485 455 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 MTBPQ96DY7 904 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 EBPLQ9BY08 206 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 SLC35C2Q9NQQ7 365 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 TMEM216Q9P0N5 145 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 TESMINQ9Y4I5 508 aa14.57□□□□□ -0.08
COL7A1-204ENST00000462475 SCO2O43819 266 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 ULK1O75385 1050 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 HMOX2P30519 316 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 TIA1P31483 386 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL7A1-204ENST00000462475 PNLIPRP2P54317 469 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 DIO3P55073 304 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 ACSM2AQ08AH3 577 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 ZNF155Q12901 538 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-204ENST00000462475 GAB1Q13480 694 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 ACSM2BQ68CK6 577 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 VWA1Q6PCB0 445 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 SCIMPQ6UWF3 145 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 UBQLNLQ8IYU4 475 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 SAMD14Q8IZD0 417 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-204ENST00000462475 FAM9CQ8IZT9 166 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 GBP7Q8N8V2 638 aaPredicted RBP14.56□□□□□ -0.08
COL7A1-204ENST00000462475 OR4K17Q8NGC6 315 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 KCNA7Q96RP8 456 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 TSPYL1Q9H0U9 437 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 NEUROD4Q9HD90 331 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 GIMAP4Q9NUV9 329 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 SENP1Q9P0U3 644 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 MRPS18CQ9Y3D5 142 aaKnown RBP14.56□□□□□ -0.08
COL7A1-204ENST00000462475 ABCA2Q9BZC7 2435 aa14.56□□□□□ -0.08
COL7A1-204ENST00000462475 A0A087WUV0 522 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 H0YC42 278 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 SIAH2O43255 324 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 PLOD3O60568 738 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 SMNDC1O75940 238 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 URI1O94763 535 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 TAC1P20366 129 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 GCAP28676 217 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 EVI2BP34910 448 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 TPD52P55327 224 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 CLDN15P56746 228 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 PSG6Q00889 435 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 FAM27E3Q08E93 113 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 HEPACAMQ14CZ8 416 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 WHAMMP3Q1A5X7 153 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 PRSS53Q2L4Q9 553 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 SPIN4Q56A73 249 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 Q71RC1 249 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 P4HA3Q7Z4N8 544 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 BIVMQ86UB2 503 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 CXorf67Q86X51 503 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 MMGT1Q8N4V1 131 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 FADS6Q8N9I5 356 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 STARD4Q96DR4 205 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 DTNBP1Q96EV8 351 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 C11orf24Q96F05 449 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 BEX4Q9NWD9 120 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 FLRT3Q9NZU0 649 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 C6orf203Q9P0P8 240 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 PPP4R1LQ9P1A2 415 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 OR10H1Q9Y4A9 318 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 TIMM22Q9Y584 194 aa14.55□□□□□ -0.08
COL7A1-204ENST00000462475 NSD1Q96L73 2696 aaPredicted RBP14.55□□□□□ -0.08
COL7A1-204ENST00000462475 SLC22A20A6NK97 555 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 MSTNO14793 375 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 CASKO14936 926 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 ATP5F1P24539 256 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 CCKARP32238 428 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 MC3RP41968 323 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 DSCR4P56555 118 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 EEF1A1P68104 462 aaKnown RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 PSPHP78330 225 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 NKX6-1P78426 367 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-204ENST00000462475 BTKQ06187 659 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 LCP2Q13094 533 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 BCL2A1Q16548 175 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 SH2D4BQ5SQS7 431 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 EEF1A1P5Q5VTE0 462 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 RAET1LQ5VY80 246 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 GALNT18Q6P9A2 607 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 CNEP1R1Q8N9A8 125 aa14.54□□□□□ -0.08
COL7A1-204ENST00000462475 OR2M3Q8NG83 312 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms